Solanum pennellii: 107023873
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Entry
107023873 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107023873
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107023873
04121 Ubiquitin system [BR:
spen04121
]
107023873
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107023873
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107023873
Membrane trafficking [BR:
spen04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
107023873
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107023873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP7_C2
DUSP
Motif
Other DBs
NCBI-GeneID:
107023873
NCBI-ProteinID:
XP_015080186
LinkDB
All DBs
Position
6:complement(56421218..56433926)
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AA seq
875 aa
AA seq
DB search
MDNPSEDSSQQQQTESSVKDDQRVYFVPYRWWKEAQDSAPSDGKSATLYAVAPAPSYGAM
KLINNIFSPDIAFNLRREEESLSQSQENGEVGVSGRDYALVPGDMWLQALKWHSNSKAAA
KNGKSFSVTDEDIADVYPLQLRLSVSRETSSLGVRISKKDNTVECFRRAYRIFSVDTEPS
RIWDLSGQTALFFSNESNDMIKDSQKQSEQDLLLELQVYGLSDSVKNKAKKDEMSVSYLN
GSSLLMNGSGSGITSNLTRSSSSSFSGGSCEAGTLGLTGLQNLGNTCFMNSALQCLAHTP
KLVDYFLGDYKREINHDNPLGMKGEIASGFGDLLKKLWAPGASPVAPKTFKVKLSHFAPQ
FSGFNQHDSQEVLAFLLDGLHEDLNRVKDKPYVEAKDGDDRPDEEIADEYWHYHLARNDS
IIVDVCQGQYRSTLVCPVCKKVSIMFDPFMYLSLPLPSTSMRSMTLTVIESGSDLQISTF
TITVPKDGKLEDLIRALSIACSLESDETLLVAEIYNNRIIRYLEEPSDSLSLIRDGDRLV
AYRLHKGTEEAPLVMFTHQQIDEHYIYGKLTSNWKAFGIPLAAHGIVLKGSDVCSLYLQL
LVPFLVQNRAQTDEHNFDRSSTEVRTEMEPDDKRVNGFPASIAEENAAEHLDMEFHFYLS
DDKAITKGAEIVMNEPLKSTDIPGRLNVLVNWSPKMVEKYNTSLFSSLPEVFKSGFFGKR
PQDSVSLYKCLEAFLKEEPLGPEDMWFCPGCKEHRQATKKLDLWRLPEILVIHLKRFSYS
RFIKNKLETYVDFPTHDLDLSSYMAYKDGKSSYRYMLYAISNHYGSMGGGHYTAFVHQGA
DRWYDFDDSHVSPINKDKIKTSAAYVLFYRRVEET
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggataacccatcggaggattcttctcaacagcaacagaccgaatcttctgtaaaagat
gaccagcgagtttatttcgttccttacaggtggtggaaggaagcacaggattcagcacca
tcagatgggaagtcggctaccttgtatgcagtagcaccagctccatcttatggagcaatg
aaactcattaacaacatatttagcccagatatcgcatttaacttgaggagagaggaggaa
tccttatcacagagtcaggagaatggtgaagttggggtatcaggccgggactatgcgtta
gtccccggcgacatgtggctgcaggcactcaaatggcacagtaactctaaagctgctgct
aagaatggaaaaagcttttcagttacagatgaggatattgcggatgtctatcctttacag
ctgaggctttctgtttcacgggaaaccagttccttaggagtcaggattagcaaaaaggac
aatacagttgagtgctttagaagagcttacagaatttttagtgtggatacagaaccctca
aggatttgggatttatctgggcagacggcgttgtttttttcaaatgaaagtaatgatatg
atcaaagactctcagaagcagtcagagcaagatctgctcttggagttgcaggtttatggg
ttatcagattctgttaaaaataaagcaaaaaaggatgagatgtcagtatcataccttaat
ggttcttctcttctgatgaatggttctggcagtggtataacctctaatctcactaggagc
agttcctcatctttttctggaggttcatgtgaagctggtaccttgggtttgactggattg
caaaacctagggaacacctgtttcatgaacagtgctctccagtgccttgcacatacgcca
aagctcgttgattactttctcggggactacaagagagaaataaatcatgacaacccattg
ggaatgaaaggagaaattgcctctggttttggtgaccttctgaagaaattatgggctcct
ggagctagtcctgtggcacctaaaacattcaaagttaagctctcacattttgctcctcaa
ttcagtggcttcaatcagcatgattctcaggaggtcttagcttttctattggatggactt
cacgaagatttgaaccgcgtcaaggataagccttatgttgaagctaaggatggagatgat
cgtccagatgaagaaatcgctgatgaatactggcactatcatctggctcgtaatgattcc
atcatagtggacgtgtgccaaggtcaatatcgctccacattggtctgtcctgtttgcaaa
aaggtctccatcatgtttgatccattcatgtatttgtcactgcctctgccatctacatct
atgaggtcgatgactctcacagttatagaaagtggcagtgatcttcagatatctacattt
acaatcactgttcccaaggatggaaagcttgaagatctaattcgtgctttgagcattgca
tgctctttggagtctgatgagacccttttggtggctgagatatacaacaaccgcattata
cgttatcttgaggagccatccgattcattgtctttaataagagatggtgaccgacttgtt
gcttatcggttgcacaagggtactgaagaagcccccttggttatgtttacacatcaacag
atcgatgagcattatatatacgggaagctgacttcaaattggaaggcatttggtattcca
cttgccgcacatggtatagttcttaaaggatctgatgtctgtagtctttatctacagtta
cttgtaccattcttagtccaaaatagagcccagacggatgagcataactttgatagaagt
tctactgaagtacgtacagaaatggaacctgatgacaaaagagtaaatgggtttccagcg
agcattgctgaggaaaatgctgccgaacatttagatatggaatttcatttttatctatca
gatgataaggcaattactaaaggcgctgagattgtaatgaatgagccattaaagtccaca
gatatccctggacggttaaatgtacttgtaaattggtcacctaaaatggttgaaaaatac
aatacaagtcttttcagctcactgcccgaagttttcaaatctgggttttttggcaagaga
cctcaagattctgtctcactgtataaatgtcttgaggcatttctgaaggaagaacctcta
gggccagaagatatgtggttttgccctggatgtaaggagcatcgccaagccactaagaag
ttggatctttggagactgccggaaattctggtcatccacctgaagaggttctcatacagc
cggtttataaagaacaagttggagacatacgttgacttccccactcatgatctcgattta
tcctcatatatggcctacaaggatggaaaatcttcctatcggtatatgctttatgcaatt
agcaaccattatggaagcatgggagggggtcactatactgcatttgttcatcaaggtgct
gatcggtggtacgacttcgatgacagccatgtgtctcccatcaacaaggacaagatcaaa
acctcagcagcttatgttctgttttatagacgagttgaagaaacctaa
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