Solanum pennellii: 107023960
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Entry
107023960 CDS
T04130
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107023960
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107023960
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107023960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8
zf-RING_16
FANCL_C
Prok-RING_1
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_4
zf-Nse
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
107023960
NCBI-ProteinID:
XP_015080297
LinkDB
All DBs
Position
7:68866309..68868520
Genome browser
AA seq
152 aa
AA seq
DB search
MGLSQYPTPADAGVLCVILVNTAISISIVKEMVRSILHVIGIHIASWDDYSIEGSLDSFE
CRRSPSESYMEEFRSRTPAIRYDSICISNHAEKECSVCLTDFEPDAEINHLSCGHVFHKH
CLEKWLKYWNVTCPLCRNYMMSQEGEEDTCPM
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgggactctcacagtatccaactccagcagatgcaggagtgctctgtgttattctagtg
aacacagccatatccatctccattgtcaaggagatggtccgatcgatccttcatgtgatt
ggcatccacattgcatcatgggacgattattccatcgaaggctccttggactcgtttgaa
tgtcgcagaagcccatcagagtcatatatggaggaattcagaagccgtacccctgcaatt
cgttatgattcaatctgtatctctaaccacgctgagaaagagtgctcagtctgcctgacg
gattttgagcctgatgcagagataaaccatctctcatgtggccatgttttccacaagcat
tgcttagagaagtggctcaagtactggaatgtaacttgtccactttgcaggaattacatg
atgtctcaagaaggcgaagaagatacttgtcctatgtga
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