Solanum pennellii: 107024069
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Entry
107024069 CDS
T04130
Name
(RefSeq) lariat debranching enzyme isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107024069
03009 Ribosome biogenesis [BR:
spen03009
]
107024069
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107024069
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
90S particles
RNase
107024069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
107024069
NCBI-ProteinID:
XP_015080442
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All DBs
Position
7:7995410..8004190
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AA seq
418 aa
AA seq
DB search
MRIAVEGCMHGDLDNVYSTLLHLQEVQNIKIDLLLCCGDFQAVRNEKDLESLNVPPKFRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPQIYFLGFAGVIKFGNIRI
GGLSGIYKSHHYNMGHYEKLPYSEQDIRSIYHVREYDVHKLLQIEEPIDIFLSHDWPVGI
TACGDLKALLRQKPFFEQEIQEGTLGSKPAAELLGKLRPPYWFSAHLHCKFAALVQHEKD
GHSTKFLALDKCLPGRNFLQVIEIESGPGPHELQLDEEWLAITRKYNAVLPLTIKNANYN
SVHLGTEQCLQFVRNKLQTRGSKPFEFVQTAPCYKPFQPVADGVFHGFYKNPQTEALLQF
LELEYLLNKMLESRKPAANLAPLISGCSFDYLGEDIPIDDIDDTEDSKEVDPEYAQEG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagctgtagaagggtgtatgcacggagacttggataatgtttattccacctta
ttgcatttgcaagaagttcaaaatataaagattgatctccttttatgctgcggcgacttt
caggctgttaggaatgagaaggatctggaaagcttaaacgtgccacctaaattccggagc
atgaactctttctggaagtattactcaggagagaaagtagcaccgtttccaactatattt
attggaggaaaccacgaagcatccaattacctttgggaactgtactatggaggatgggca
gcacctcagatatacttccttggatttgctggagtaataaagtttggcaacattcgaatt
ggtggcctttctggaatttataaatcacaccattacaatatggggcactatgagaagcta
ccttatagtgaacaggatattcgatcgatatatcacgttcgcgagtatgatgtccacaag
ctcttgcaaattgaggaaccaattgatatctttctttcacatgactggcctgttggcatc
accgcctgtggggacttgaaagctcttcttcgtcaaaaacctttctttgagcaagagatt
caggaaggaactctgggaagcaaacctgctgcagaattactgggaaagttgaggccgcct
tactggttttctgcacatctgcactgcaaatttgctgctttagttcagcatgagaaggat
ggtcattccactaagtttcttgctcttgataagtgcctccctggtagaaactttttgcag
gttattgaaattgagtccggaccaggaccacatgaacttcaacttgatgaagaatggttg
gctatcacaagaaagtataatgctgtcttgcccttgacaatcaagaatgcgaactataat
agtgtgcatctcggcacagaacagtgcctccagtttgtaagaaataagctgcagacaaga
ggatccaagccgtttgaatttgttcagactgcgccatgctacaaaccttttcaacctgta
gctgacggtgtcttccatggtttctataaaaaccctcagacagaagctcttctacagttt
ctggaacttgagtatcttctcaataaaatgctagaatcaaggaagcctgctgcaaatcta
gccccattaatttcaggatgttccttcgattacctcggtgaagatatacccatagatgat
atagatgatacagaggattccaaagaggttgacccggaatatgctcaagaaggataa
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