Solanum pennellii: 107024119
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Entry
107024119 CDS
T04130
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107024119
04121 Ubiquitin system [BR:
spen04121
]
107024119
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
90S particles
Other 90S particles
107024119
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107024119
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
NBCH_WD40
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_WDR19_1st
VID27
WDR54
Motif
Other DBs
NCBI-GeneID:
107024119
NCBI-ProteinID:
XP_015080504
LinkDB
All DBs
Position
7:73320514..73327742
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AA seq
452 aa
AA seq
DB search
MRLKVISRSTDDFTRERSQDLQRVFRNFDPSLRHQEKAVEYVRALNAVKLEKIFARPFVG
AMDGHIDAVSCMAKNPNHLKGIFSGSMDGDVRLWDLATRRTVRQFPGHQGAVRGLTVSTD
GRILVSCGTDCTVRLWKVPVATLMESDDGSDNSSQPLAVHVWKNAFWGVDHQWDGDLFAT
AGAQVDIWNHNRSQPVNSFEWGKDTVTSVRFNPGEPNLLATSASDRSISIYDLRLSTPAR
KVIMSTKTNSIAWNPMEPMNFTAANDDGRCYSYDVRKLNEAKCVHIDHTSSVMDIDYSPT
GREFVTGSYDRSVRIFKYNGGHSREIYHTKRMQRVFCVKFSCDASYIISGSDDTNLRLWK
AKASEQMGVVLPRERKRHEYMEAVKNRYKHLKEVRRIDRHRHLPKPIYKASRQIREMTES
ARRKEERRKAHSAPGSIKNKQLRTKRIVREVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgaaagttatatctcggtctacggatgattttactcgtgaacgcagtcaggac
cttcagagagtttttcggaacttcgatcccagccttcgacatcaagagaaggcagtggaa
tatgttcgtgctctgaatgcagtaaaactggagaagatatttgcaagaccattcgttgga
gcaatggatgggcacattgatgctgtctcttgcatggcaaagaatcctaatcacttgaaa
ggaatattttctggctccatggacggtgatgttcgcctatgggatttggctaccaggcgg
acagtacgtcagtttcctggtcaccagggtgcagtacgtggtttgacagtgtccacggat
ggccgaattcttgtatcatgtggaactgattgcactgttaggctctggaaagttcctgtt
gctactctaatggagtctgatgatggatctgataactcgtcccagccattggctgttcat
gtttggaagaatgcattctggggtgttgaccaccaatgggatggtgatctctttgccaca
gctggtgctcaagttgacatttggaaccataacaggtctcagccggttaatagttttgaa
tggggaaaagacacagttacatctgttcggtttaatccaggggaacctaatcttttggct
acatcagcaagtgatcgaagcataagcatctatgatttacggctttctacaccagctaga
aaggttattatgtcgacaaaaactaattctatagcatggaatccgatggagccaatgaat
tttactgccgctaatgatgatggcagatgctacagttatgatgttagaaagttaaatgaa
gccaaatgtgtgcatatagatcatacctcttcagtgatggatatagattattcaccaacc
ggtcgagaattcgttactggatcttatgatagatctgtgagaatattcaaatataatggt
ggtcacagcagggaaatttatcacactaagaggatgcagagggtattctgtgtcaagttc
agttgcgatgcaagttatattatctcaggaagtgatgataccaacctacgtctatggaaa
gcaaaagcatctgagcaaatgggagttgttttgccaagagagcggaaaagacatgaatat
atggaggctgtcaagaatcgttacaagcatcttaaagaagtcaggcgcattgacagacat
agacacttgccaaaaccaatctacaaggcaagtagacaaatacgtgagatgacagaatct
gcgaggcggaaagaggagaggaggaaagctcacagtgctcctggaagcattaagaataag
caactgcgaacaaaaagaattgtccgagaagtcgaatga
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