Solanum pennellii: 107024232
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Entry
107024232 CDS
T04130
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
spen
Solanum pennellii
Pathway
spen03440
Homologous recombination
spen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107024232
03460 Fanconi anemia pathway
107024232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107024232
03400 DNA repair and recombination proteins [BR:
spen03400
]
107024232
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107024232
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107024232
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
107024232
Bloom's syndrome complex (BTR)
107024232
FA (Fanconi anemia) pathway
107024232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
107024232
NCBI-ProteinID:
XP_015080657
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All DBs
Position
7:complement(65347379..65362685)
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AA seq
730 aa
AA seq
DB search
MNKSLLPLQSNCGRQKNVIGKEALVKLLRWHFGHSDFRGKQLEAIEAVLSGRDCFCLMPT
GGGKSMCYQVPALTKPGIVLVVSPLIALMENQVSTLKEKRIPAEFLSSTQTVQVKNKIYE
DLESGKPAVRLLYVTPELIATSGFMSKMTKIHARGLLNLIAVDEAHCISSWGHDFRPSYR
KLSSLRSHFPNVPVLALTATAVPKVQKDVIESLNLQNPLVLKSSFNRPNIYYEVRYKDLL
DDPYADVCKLLKSCGNVCAIIYCLERTMCDDLAIHITSSGISCAAYHAGLNNKMRSSVLD
DWISSKTQVVVATVAFGMGIDRKDVRVVCHFNIPKSMEGFYQESGRAGRDQLPSRSVLYY
GVDDRRKMEFILNNTKRSKDESSSLQDKSSKKSLDDFKQMVEYCEGSGCRRKMILENFKE
MVPDSLCEKSCDVCKHPNLVTSNLEQLKTATAFRQRGGSSRIYMTSGSSLNAGEQLSEFW
NRDDEASGSEEDISESDDSLDAAKNVASSKTSAKLRLQDKMDLLQRAEENYYQNKSHDKQ
VNKLDKNAIPEKLREAGKQRLLNAIKQNQQMVNDSRIDIDKSVIFLENECYKKYGKSGKS
FYLSQMASTARWLSTAGPMELVNKLSSSSTATPPENVTSIADCSPASSNLSVPISARAND
EEVHDNAGSQDPIRSPASPLHGSASAKLPPILSFSQFINSGKAKGNLASASKRQSPDRGK
NKLEKRMRFQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcactattacccttgcaaagtaattgtggacgtcagaagaatgtgattggg
aaggaagctttagtcaaactattgagatggcattttggacattctgatttcagggggaag
caattggaagctattgaagctgtgttatcaggaagggattgcttttgcctcatgccaact
ggtggagggaaatccatgtgctatcaggtccccgctttgacaaaaccaggaattgtgctt
gttgttagtcctttgatagctctcatggaaaatcaagtttcaacattgaaagaaaaaagg
attcctgctgaatttctttcttcaacccagacagttcaagtgaaaaacaagatatacgag
gacctcgaatctgggaagccagctgtaaggttactgtacgtgacaccagaattaattgcg
acatctggatttatgtcaaaaatgacaaagattcatgctagaggattgttaaatctcatt
gccgttgatgaggcacattgcatctcttcatggggccatgacttcaggcctagctatcgg
aagctttcttcactgagaagtcatttcccaaatgtaccagtattggctttgacagcaact
gctgtccctaaagttcagaaagatgtcatagagtcattgaatttgcaaaaccctctagtc
ctgaaatcatcgttcaaccggccaaatatctattatgaagttcgctataaagaccttttg
gatgatccatatgctgacgtgtgtaaattactaaaatcttgtggaaatgtgtgcgctatt
atttattgtctggaacgtactatgtgtgatgatcttgcgatccatataaccagcagcggc
atttcttgtgctgcttatcatgctgggctgaacaataaaatgcggagctctgtcttggat
gactggatttcttcaaaaacacaagtggttgttgcaactgtagcttttgggatgggtata
gatagaaaggatgtcagagtggtctgtcacttcaatattcccaaatcaatggaaggcttc
tatcaagagtcaggtagagctggacgtgatcagttgccttccagaagtgtactgtattat
ggagtggatgaccgtaggaaaatggagtttattttaaacaatactaaaaggagtaaggat
gagtcctcaagcttgcaagataaatcttcgaagaagtccctggacgacttcaaacagatg
gttgagtattgtgaagggtctggttgtcgtaggaaaatgatacttgagaactttaaggag
atggtacctgattctttatgtgaaaaatcatgtgatgtgtgcaagcatcctaatctagtt
acaagtaacttggagcaacttaaaactgcaactgcttttcggcagagaggtggatcttca
agaatatatatgaccagtggttcaagtcttaatgccggagaacaattgtcagaattctgg
aaccgtgatgatgaagcaagtggatcagaagaagatatatctgaatctgatgattctctg
gatgctgcaaagaatgtcgcttcatcaaaaacatccgcaaagctcaggttgcaagataaa
atggatttgctgcagcgtgcagaagagaattattatcagaacaaaagccatgataagcag
gtcaataaacttgacaagaatgccatacctgaaaaactcagggaagcaggcaagcagaga
ttgctgaatgcaataaagcaaaaccagcagatggtcaacgattcgaggattgacattgat
aaatccgtaattttccttgaaaatgaatgttataagaagtatggcaaaagtggaaagtct
ttctatttatcacaaatggcaagtacagctaggtggctttctacagcaggtccgatggaa
ttggtgaataagctcagcagttctagtactgctactcctcctgagaatgtaacatccata
gccgactgcagtccagcatcatcaaatctttcggtgcctatatcagcaagggctaatgac
gaagaagtccatgacaacgctggatcacaagatccaataagatcaccagcctcacccttg
catggatctgcaagtgcaaagttaccacccatcctgtctttctctcagtttatcaacagt
gggaaggcaaaggggaaccttgcatctgcatcaaagaggcaatcacccgatagaggtaaa
aataagttagagaagaggatgagatttcaatag
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