Solanum pennellii: 107024446
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Entry
107024446 CDS
T04130
Name
(RefSeq) cellulose synthase-like protein D4
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spen01003
]
107024446
Glycosyltransferases [BR:
spen01003
]
Polysaccharide
Structural polysaccharide
107024446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
107024446
NCBI-ProteinID:
XP_015080923
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All DBs
Position
1:86215766..86219881
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AA seq
1111 aa
AA seq
DB search
MASLTAAPSKKISNKESSSGQAVKFARRTSSGRYVSMSREDIDMSGELSRDYMNYTVQIP
PTPDNQPMDMSIAAKAEEQYVSNSLFTGGFNSVTRAHLMDKIIESEVYHPQMAGSKGSSC
SMPACDGKIMKDERGNDVIPCECRFKICRDCYMDAQKDVGLCPGCKEAYKVGDLDDEIPN
FSNGALSLPAPDGSKGMIRRNQNGEFDHNKWLFETQGTYGYGNAYWPDDRDGDDGDRGGM
PKTMLDTSADIPWKPLSRVLPMSHGLISPYRLLNFIRLVLLVFFLAWRIQHPNPEAMWLY
VMSIICEIWFAFSWIVDQMPRMSPVNRSTDLVVLREKFEMPSPSNPLGRSDLPGVDIFVS
TADPEKEPPLVTANTVLSILAADYPVEKLTCYVSDDGGTLLTFEAMAEATSFADLWVPFC
RKHAIEPRNPEAYFLLKGDPTKNKKRGDFVKDRRRVKREYDEFKVRMNSLQDSIRRRSDA
FNAREEMKMLKQMKENETNPAEAIKVQKAIWMADGTHWPGSWSIPSRDHRNDDHPGILQV
MLKPPSSDPLMGGGDQDKLLDFSEVDIRLPMFVYVSREKRREYDHNKKAGAMNALVRASA
ILSNGAFILNLNYDHYIYNCLAIREGMCFMMDRGGEDICFIQFPQRFEGIDPSDRYANHN
TVFFDGNMRALDGLQGPMYVGTGCMFRRFALCGFEPTKPDKTPQKDVEAEALKATEVDYD
FDVNVLTKRFGNSTMLAESIPIAEFQGRPIADHPAVKFGRPPGALRTPKEPLDATNVAEA
VSVISCWYEENTDWGIRMGWIYGSVMEDVVTGYRMHNLGWRSIYCITKRDAFRGSAPINL
TDRLHQVLRWAIGSVEIFYSRNNAILGTRKLKFLQRIAYINVSIYPCTSIFLVVFCFLPA
LCLISGQFIVQNFSVAFLVYLFGLSICIIGSAILEVKWSGVSLEDWWRNEQFWVISGTSS
HLAAVVLGLLKVFMGFETSFTPTSNKSVGEDVDEAYAELYMVKWTPLMIPPIVIGMVNII
AVVVAFSRAIFAIIPQWGKFIGGAFFAFWVLAHLYPFAKGLMGKRRKTPTIVFVWSGLIA
ITLSLLWIAFANPAAGPGAVQGVAGGGFQFP
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcttaacggctgcaccatcgaagaagataagtaataaggaaagttcaagtgga
caagcagtaaaatttgcacgtagaacgtctagtggacgatatgttagcatgtctagagaa
gacattgatatgtcgggtgaattgtcaagagattacatgaattatactgttcaaatcccg
cctacgcctgataatcagccaatggatatgtctattgctgctaaagcagaagagcaatat
gtttctaattcattatttacagggggattcaacagtgtcactcgcgcacatcttatggat
aagatcattgaatccgaagtttatcatcctcaaatggctggatctaaaggatcatcatgt
tccatgcctgcttgtgacggaaagatcatgaaagatgaacgtggtaacgatgtaatccca
tgtgaatgcaggttcaaaatatgtagagactgttacatggatgcacaaaaagacgttggt
ctatgccccggttgcaaagaagcttacaaggtaggggatcttgatgatgagatcccaaac
ttttctaatggagcattgtcattaccggcaccagatggttcaaaaggtatgatcaggaga
aatcaaaatggagagtttgatcacaacaaatggttgttcgagacacaaggaacttacggg
tatggaaatgcttattggcctgatgatagggatggagatgatggtgatagaggaggtatg
cctaagaccatgttggatacatctgctgatataccttggaaacccctcagtagggtgttg
ccaatgtcgcatggcctaattagcccttataggttgctaaattttattcgactagtacta
ctagtattcttcttggcatggagaatacaacatccaaatccggaggcaatgtggttatac
gtgatgtcaattatatgtgaaatatggtttgcattttcatggattgtggatcagatgccc
aggatgtcgccagttaatcggtctactgacttagtggtactacgcgagaagtttgaaatg
ccatcaccatccaatcctttaggtaggtcagatctaccaggagttgatatatttgtatca
acggctgatccagagaaagagccgccccttgtcacagccaacactgtcctatccatctta
gcagctgactatcccgtggagaagctaacttgctatgtctcagacgatggcggtaccctt
ctaacgtttgaggcaatggcagaagctactagctttgctgatttgtgggtaccattctgc
aggaaacatgctattgagcctaggaatcctgaagcctattttctcctcaagggagaccct
acaaagaacaagaagagaggtgatttcgttaaagatagacgaagggtaaaaagagaatat
gatgaatttaaggtaagaatgaacagtctgcaagattcgataaggaggagatcagacgcg
tttaatgctcgagaagaaatgaagatgttaaagcagatgaaagagaatgagactaatcct
gcagaggcaatcaaagtgcaaaaggctatttggatggctgatggaactcactggcctggc
tcatggtctatccccagcagggatcatcgcaatgatgatcatcccgggatccttcaggta
atgttgaaacccccaagtagtgatcccctaatgggagggggtgatcaagataagctatta
gatttttcggaggtggacataaggcttccaatgtttgtgtatgtgtcgcgtgagaagaga
cgtgagtatgatcacaataaaaaagcaggtgccatgaatgccctagtaagagcttctgcc
attttatctaatggtgcattcatactcaaccttaattatgatcactatatatacaactgc
ttagctattcgtgaaggcatgtgtttcatgatggacagaggtggagaagacatatgtttt
attcaattccctcaacgttttgaaggaatcgatccctctgatcgttatgccaatcacaac
actgtgttttttgatggaaatatgcgcgcccttgatggtctgcagggtcctatgtacgtt
gggacgggctgcatgtttaggcgatttgcactttgtggattcgagccaacaaaaccagat
aagacaccacaaaaagatgtagaggctgaagcattgaaagccacagaagttgattatgac
tttgatgtgaatgtactaactaagagatttggaaactccacaatgttagctgaatctatt
ccaattgctgagttccaaggtcgtccaatcgctgatcaccctgctgtcaagtttggacga
cctcctggtgctcttagaaccccaaaggaaccacttgatgccaccaacgttgccgaagca
gtctctgttatatcttgttggtacgaagaaaatacagattggggtattcgaatgggatgg
atttatggttcagtgatggaagatgtggttactggataccggatgcacaatcttggatgg
cgttctatatattgcatcacgaaacgtgatgcattccgtggatcagctcctataaatcta
acagacagactacatcaagtactccgttgggctataggttccgttgaaatcttttactca
agaaacaatgcaattcttggaacaagaaagctcaaattcctccaacgtattgcttacatt
aacgttagcatttatccttgcacatcaattttcctggttgttttctgttttctccctgca
ctctgcctcatatccggtcaattcatagtccaaaatttcagcgtagcgttcctagtatat
ctattcggtctatccatctgtatcattggttcagctatcttagaggtgaaatggtcaggt
gtttctttagaggattggtggagaaatgaacaattttgggttatttcaggtactagttca
catcttgctgctgttgtgctaggtttacttaaagtattcatgggatttgaaacatcattt
actcctacatctaataaatctgttggagaagacgttgatgaagcgtatgctgaattgtac
atggtgaaatggactccattgatgataccgcctatagtcattggtatggttaacataatt
gcagttgtagttgcattttctagagcgatattcgccattatacctcaatggggaaaattc
attggtggtgcatttttcgccttttgggtgttggctcacttgtatccttttgctaaagga
ttgatgggtaaaagaagaaaaacacccacaattgtgtttgtttggtcaggtctcattgct
ataacactatcgttgctatggatagcttttgctaatccagcagctggtcctggtgctgta
caaggggttgctggtggtggatttcaatttccttga
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integrated database retrieval system
