Solanum pennellii: 107024476
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Entry
107024476 CDS
T04130
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107024476
03400 DNA repair and recombination proteins [BR:
spen03400
]
107024476
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107024476
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107024476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-MIZ
zf-RING_UBOX
zf-RING_2
Med18
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
107024476
NCBI-ProteinID:
XP_015080948
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Position
7:complement(76491189..76494606)
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AA seq
257 aa
AA seq
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MASTSGAGSGVAAGRIRSHTSALYSDSQSLILEIRKSVTMMKDIAVHLERDERTQMVKDL
EDGVVQLLAASDECMHLSEAIQSIGDTLEPGPEPTNFKKKFDEEIAKSKARSSSHTQNQS
LLRKFREAVWHVHHEGQPMPGDEQEDIVMTSTQCNLLNVTCPLSGKPVIELVEPVRSMDC
KHIYDKKAIMQYMKKSKSTRGQCPVAGCPKILKAQRVLCDPFLLIEIDEVRSMNKQNARP
DGIEDFTALDEDEDEDN
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgtccggcgcaggcagcggcgtagctgccggaaggatcagatctcataca
tcggcgctgtactccgacagtcaatccctcatccttgaaattaggaagtctgtgactatg
atgaaagatattgcggtccacttggagagagatgagagaacccaaatggtaaaagatctt
gaagatggtgttgttcagttgttggcagcatccgatgagtgcatgcatctatctgaggca
attcagtctataggtgatacattagagcctgggccagagccaacgaattttaagaagaag
tttgacgaagaaattgcaaaatcaaaggctagatcatcgtctcacactcagaaccagtct
ttgttgagaaaattccgggaagccgtctggcatgttcatcacgaaggacagccaatgcca
ggtgacgagcaggaggacattgtaatgaccagtacacagtgcaaccttctgaatgtgact
tgcccattaagtggaaagcccgttattgaacttgttgaaccagttcgtagcatggactgc
aagcatatatacgataagaaggctatcatgcagtacatgaagaagtccaaaagcacacgt
ggccaatgtcccgttgcaggttgtccgaaaattctgaaggcgcagagggtgttatgtgac
cctttcttacttatagaaattgatgaagtccgctctatgaataagcaaaatgctagacct
gatgggatagaagattttactgcgctggatgaagatgaagatgaagataattga
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