Solanum pennellii: 107024560
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Entry
107024560 CDS
T04130
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
spen
Solanum pennellii
Pathway
spen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107024560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107024560
04121 Ubiquitin system [BR:
spen04121
]
107024560
03400 DNA repair and recombination proteins [BR:
spen03400
]
107024560
Membrane trafficking [BR:
spen04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107024560
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
107024560
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
107024560
RecA family proteins
107024560
FA (Fanconi anemia) pathway
Other FA pathway factors
107024560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
DnaB_C
AAA_22
HhH-GPD
HHH
ATPase_2
Motif
Other DBs
NCBI-GeneID:
107024560
NCBI-ProteinID:
XP_015081039
LinkDB
All DBs
Position
7:complement(7662827..7666466)
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AA seq
342 aa
AA seq
DB search
MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR
KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKILEGGI
ETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
YGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHAST
TRLALRKGRAEERICKVVSSPCLAEAEARFQISVEGVTDVKD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagcacaggaatcagaagtcgatgcaagaccaaaatgatgaaatcgaggat
gttcaacacggcccttttccagttgaacaacttcaggcatcagggattgcagctctagat
gtaaaaaaactcaaggatgctggtctatgtacagttgaatctgttgtttatgctccaaga
aaggaacttctgcagataaaaggaattagtgaagctaaagttgacaagatcattgaggca
gcttcaaaattagtgcctttgggattcactagtgccagccaactccatgcacagaggctt
gaaatcatacagataacttctggatcaaaagaacttgacaagatattagaaggaggaatc
gaaactggatctattactgaaatttacggagagttccgatgtggaaagactcagctgtgt
cacacactatgcgtgacttgtcaacttccattagatcagggaggtggtgaagggaaagca
atgtacattgatgctgagggtactttcagaccacaaagacttttacaaattgcagacagg
tatggattgaatggtcctgatgttctggagaatgtagcctatgctcgagcttataatacc
gatcatcaatcaagacttttgcttgaggcagcttcaatgatggtggagaccaggtttgct
ctcatgattgtggacagtgctactgccctttatagaactgacttttctgggagaggagag
ttgtctgccaggcagatgcatcttgcgaagtttctgagaagccttcagaagttagcagat
gagtttggtgttgctgttgttattacgaaccaagttgttgctcaagtggatggttctgct
gtatttgctgggcctcaaataaaacccattggtggcaacatcatggcacatgcttctaca
acgagactagctctgaggaagggtagggccgaggagcggatttgtaaagtagtcagttcg
ccatgcttagctgaagcagaagcaagatttcaaatttctgttgaaggagtcactgatgta
aaggactaa
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