Solanum pennellii: 107025661
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Entry
107025661 CDS
T04130
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X2
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107025661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107025661
Spliceosome [BR:
spen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107025661
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
107025661
NCBI-ProteinID:
XP_015081910
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All DBs
Position
7:77485968..77487859
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AA seq
323 aa
AA seq
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MRIKELLPSAIIMVVSVTASTTSGKPLPEDVLQRTLEACDRTLALDSSKKKVVDFVESRM
STIAPNLCGVVGSAVAAKLMCCAGGLSLLANMPADNVRSLGGKRKNLAGFSTANASRFCY
IEETDVYQSTPPSLRVKVCRILANKAILAARMDLSKAGMFSFKEEICKKIEKLQELPPAR
LPKPLPVPDFRSKKQRGGIRHRKRKDVYQVTEAQKMRNRVKFGSPEESSLGDGLGVGYGM
LGQAGSGKLLVSARQNKKKAKINKVKSYGSSGSGLMSSSFAFTPVQGIELSNPQAYSDGT
QSTYFSETGTFSKIKRQKSVFDV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgaataaaggaattgttaccttcagctattatcatggttgtttctgttacggcgtca
actactagtggcaagccgttgccggaggatgttttgcagaggacattggaagcatgtgat
agaaccctagctcttgattcatcgaagaagaaggtcgttgattttgttgagagtcgaatg
agtactattgctcctaatctgtgtggtgttgttggtagtgcagttgctgcgaaactaatg
tgttgtgctggtggtttatcgttgttggcgaatatgcctgctgataatgtgaggagtctg
ggtggtaaaaggaagaatttagcagggttttccacagctaatgcttcgcgattttgttat
attgaggaaacagatgtatatcagagtacacctccttcgttgagggtgaaagtttgtagg
attttggcgaataaagctattctagcagcacgaatggacttgagcaaagctggaatgttc
agttttaaggaagagatttgtaaaaagatagagaaattgcaagagttacctcctgcaagg
ctgccaaagcctcttccagttcctgattttaggtctaagaagcagagaggtggtattcgg
catagaaagaggaaagatgtatatcaggttacagaggcgcagaagatgaggaatagggtg
aagtttgggtcacctgaagaaagctcgttaggggatggattaggggtgggctatggtatg
cttggtcaggctggaagtggcaagttgcttgtatcagctcgtcagaacaagaaaaaagca
aagattaacaaggtgaagagttatggaagcagtggatcaggcctgatgagttcgagtttt
gccttcacaccagtacaagggattgagctatcgaatcctcaggcatattcggatggaact
caaagcacctatttttctgagacaggaacattttcgaagattaagagacaaaagtccgtt
tttgatgtttga
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