Solanum pennellii: 107025686
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Entry
107025686 CDS
T04130
Name
(RefSeq) WD repeat-containing protein 26 homolog
KO
K22382
WD repeat-containing protein 26
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107025686
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107025686
CTLH complex
107025686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
EIF3I
LisH_WDR26
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IP5PC_F
TPR1-like_2nd
Motif
Other DBs
NCBI-GeneID:
107025686
NCBI-ProteinID:
XP_015081933
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Position
7:68419015..68432618
Genome browser
AA seq
580 aa
AA seq
DB search
MGAEDDDEPPSKRVKVSSGQLVDISDRTFVRDPASCSLGDSMARPLTLQGDDEVVGTKGV
VKKVEFVRIITEALDSLGYKKTRALLEEESGIPLHTSVVNLFMQQILDGKWDESLNTLRK
IGLVDEKIVKLASFVILEQKFFELLHKEKVMDALKTLRGEISPLCINNDRVHQLSFFIIS
PSQQVLTGVSGQGTARIKSRTNLLEELQRLLPPTVMVPEKRLVHLVEQALDLQLDACRFH
NSVVGEMSLLSDHHCGRDHIPSLTMQILHEHKDEVWFLQFSHNGKYLASSSADFAVIIWE
VKLDGSVCMKHRLLGHETYVSYISWSPDDHQLLTCGEEEAVIRWDVESGVRIHTYEKKFV
KFISCGWAPDGKRIFCGVTDKSISMWDLEGKELECWKGHRTTRISDLGITSDGKHVVSVC
KENMIVLVGWESKVERVIQEDQAITSFVLSMDSKYVLVSLSNQEIHLWNIEGTVKLVAKY
KGHKRSRFVVRSCFGGLDQAFIASGSEDSQVYIWHRGSGELVATLAGHSGAVNCVSWNPT
NPHMLASASDDGTIRIWGDNRVNTKQHDTDNGVNYCNGLS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgaggacgatgatgaaccaccatcaaaacgtgtgaaggtatcctccggtcaa
ttggtagatatttctgacaggacatttgttagagatcctgcaagttgttcattgggtgac
tcgatggctcgacccctgactcttcaaggggacgatgaggttgttggtactaaaggagtt
gtcaagaaagttgaatttgttcggattataactgaggcattagattctcttggttacaaa
aagactcgggccttactagaggaagagtcagggatacccttgcacacttccgtcgtaaat
ttgtttatgcagcaaattcttgatggtaaatgggatgaaagtttaaacacattgcgaaag
attggtctggtggatgaaaaaattgtaaagttggcatcttttgtgatattggagcagaag
ttttttgaattgttgcacaaggaaaaagttatggatgctctgaagacactgaggggcgag
atctcacctctttgcataaacaatgatagagtccatcagctttcgtttttcattatatca
ccttctcagcaggttcttactggggtatcaggtcaaggcacagcgagaataaagtcacgt
acaaacctactagaggaattgcaaagattgcttcccccaacagttatggttccagaaaag
agattggtacatcttgttgaacaagctcttgacttgcaactagatgcttgtagatttcac
aactctgtggttggtgaaatgtcactgctcagtgatcatcactgcggaagagatcatatt
ccatctctaacaatgcagatattacatgaacataaagatgaagtctggttcttgcagttt
tcccataatggaaagtacttagcctcgtcatctgccgattttgcagtaattatatgggag
gtcaaattggatggcagtgtctgcatgaaacacagacttttgggtcacgagacatatgtc
tcgtatatatcatggagtcctgatgaccatcagcttctcacttgtggtgaagaggaagct
gtcattcggtgggatgtcgagtctggtgtacgtatacacacttatgagaaaaaatttgtt
aagtttatctcatgcggctgggctcctgatggaaaaaggatattctgtggtgtaactgac
aaaagcattagcatgtgggatttggaagggaaagagcttgagtgttggaaaggccacagg
actactagaatatcggacttggggataacaagtgatgggaagcatgttgtctctgtttgt
aaagaaaatatgatagtattagttggatgggaatcaaaagtagagagagtaattcaggag
gatcaagcaataacctcatttgtattgtccatggacagtaagtatgtgttggttagtctt
tcaaaccaagaaattcatctctggaatatcgagggaactgtaaaactcgtagccaaatat
aaggggcataaacgttctcggttcgttgtgaggtcttgctttggaggactagatcaagct
tttattgccagtggaagcgaggactcacaggtttatatatggcacagaggctcaggtgaa
cttgttgcgacactggctggacattcaggggcggtgaactgtgttagctggaacccaaca
aatcctcatatgctggcatctgcgagtgatgatggtacaattcgtatatggggcgataat
cgagtaaacacaaagcaacatgacactgataatggtgtgaactactgcaatgggctaagt
tga
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