Solanum pennellii: 107025806
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Entry
107025806 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107025806
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107025806
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107025806
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107025806
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107025806
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
BSH_YhbJ
Motif
Other DBs
NCBI-GeneID:
107025806
NCBI-ProteinID:
XP_015082035
UniProt:
A0ABM1H8Q0
LinkDB
All DBs
Position
7:587840..595723
Genome browser
AA seq
923 aa
AA seq
DB search
MGEATIDKMEENLGQEISGLIGSDPGLDTSSSVFHRKIEFHLARKPFNGFISGKNNGGFQ
LETLNPSSETRKENGSLVGAGKKGGGDKMMESNGMDPEVSFGIAFRKIMRIGAGLQNLGN
TCFLNSVLQCLTYTEPLAAYLESGKHQSSCRMAGFCALCAIQKHVSRALQATGKILAPKD
LVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPSAYEKSLVHKIFGGR
LRSQVQCMQCKFCSDKFDPFLDLSLEILRADSLLKALDHFTARELLDGGQRQYQCQQCKQ
KVKATKRLTIDRAPHVLTVHLKRFGSHVPGQKIDKKIHYGPTLDLKHFVSDTYSGELKYT
LYGVLVHAGWSTHSGHYYCFVRTSSGNWYSLDDNQVVQVSERKVLEQKAYMLFYVRDKKS
PVPKKSVDVARNDNVITNGIGNKISSNHSQRFKDAAQNGFHVKNEGSLSGTKDQRETLSA
EVSKGTSTKDLTPPKVNGAVVSGFSSHGGAIQPENLPKVQETGDSVKDPSVVDAKDGPSL
LKANPAVPVCNGTHRLDNKGDARCGDSTPLPNGNVTIKELTCSAAIPFHFSSVNSDKDPS
TPAKLLNKQVECSKADTNIQVVKGISNGSLGGSAVEVNNDVGQRKAGAESAGVLSQPTMT
SSAEKVAIDKACLKAKKKSFKSRVTKLHLSFMILDPALGLNRKKKRMNRRIGKRKRSNPS
SMDESNSDLGPSTSKLSHTLISSPMQSQRKKSKLGSNERVSSTAGHNGDLLRNTVNDERV
VNNGTVLANDKQPQKSSSLAPVGSQGVDNIQSTDSKETKVVATRKGLLNMLTRGLESSVA
RWDDVEVRSLKGVEAQNGSCVTIGYIGDEWDEEYDTGKRRKIRSSKIEFGGPNLFQDFAS
KKTKVKKARLERSSSANQPFRIL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagctacaattgataaaatggaggaaaatttgggtcaagaaatatctgggtta
attgggtcggatccgggtttggatacgtcgtcgtcggtgtttcatcggaagattgagttt
catttggcgaggaaaccgtttaatgggtttatcagtgggaaaaataatggtgggtttcag
ctggaaacactgaacccgagttcggagacccgtaaagaaaatgggtcacttgtcggcgcc
ggaaaaaagggtggcggtgataagatgatggaaagtaatgggatggatccagaagtgagc
tttggaattgctttcagaaaaattatgagaattggagctggcttgcaaaatcttgggaac
acctgcttcctcaattcagtattacagtgtctgacatacactgagccattagcagcatac
ttggaaagtgggaaacatcaaagttcctgtcgtatggctggtttttgtgctttatgcgcc
atccaaaaacacgtgagtcgtgctttgcaggcaactgggaaaatactggcgcccaaggat
cttgtgtcaaacttacgatgcatatcgcggaattttcgaaatgctagacaggaggatgca
catgaatacatggtgaatctgctcgagtcgatgcataaatgttgcttaccttcaggagtg
cctagtgaatcccccagtgcttatgagaaaagtttggttcataagatatttggtgggcga
cttcgcagtcaggtgcagtgcatgcagtgtaaattttgctctgacaagtttgatccattt
ctggatctaagtctagaaattttgagggcagattcactactcaaagcacttgaccatttt
actgccagagaactcttagatggtggtcagaggcagtaccaatgtcagcagtgcaaacag
aaagtgaaggctactaaacggctaacaattgaccgggcacctcatgtcctcactgtccac
ttgaagcgatttggttcacatgtccctgggcaaaagatcgataaaaagattcattacggg
cctactttagacttgaaacattttgtatctgatacctatagtggtgaattgaagtacaca
ctctatggtgtgctggttcatgcaggttggagcacccattctggtcattattattgcttt
gttcgcacttcaagtggaaattggtactcccttgatgacaatcaggttgttcaagtgagt
gagagaaaggtgttggagcagaaggcatacatgttattctatgttcgggataagaaatct
cctgtgcctaagaagtctgtagatgttgcccgcaatgataatgtgattactaatggcata
ggaaataaaatatcttctaatcacagccagagatttaaggatgctgctcaaaatggattt
catgtgaagaatgagggatccttatctggtacaaaagatcaaagggagacattaagtgcc
gaagtttcaaagggaacttcaacaaaggatctgacacctccaaaggttaatggtgcagta
gttagtgggttctcttctcacggaggggctatacagccagaaaatttgccgaaagtacaa
gaaacaggtgacagcgtaaaggacccttctgttgtagacgcaaaggatggaccatcctta
cttaaagctaatcctgctgttccagtctgcaatggaactcatagacttgataacaagggg
gacgcaagatgcggagactctaccccactacctaatggcaatgtaaccatcaaagagttg
acttgctctgctgcaataccatttcactttagcagtgtaaatagtgacaaagatccaagc
actcctgccaaactgttgaacaaacaagtggaatgcagcaaggcagacaccaacattcaa
gtggtaaaaggcatctccaatggcagtttaggtggttcagctgttgaagttaacaatgat
gttggacagagaaaagcaggtgctgaatccgctggagtactgagccaaccaactatgact
agctcggcagaaaaggtagctattgacaaggcatgcttgaaagccaaaaagaagtcgttc
aagagtcgtgtcaccaagttgcatctcagttttatgatcttagatccagctttgggactg
aataggaagaaaaaacgaatgaatcgtagaattggaaagagaaagcgcagcaatcccagt
tcgatggatgagagcaattctgatcttgggccatctacatccaaattatcccatactttg
atatcttctccaatgcagtctcaaagaaagaagtcaaaacttggttccaatgagagagtt
tccagtactgctgggcacaatggggatctgctgaggaatacagttaatgatgaaagagtt
gtgaacaatggcactgtattagcaaatgacaaacaaccacaaaaaagctctagtttggca
ccagtaggaagtcaaggtgttgacaatatacagtctactgattctaaagagactaaagta
gttgcaacacggaaaggtctgttgaatatgcttaccagagggttggagtccagcgttgct
cgttgggacgacgtcgaagttcgttccttgaaaggtgtagaagcacagaacggaagttgt
gtcaccattgggtacattggggatgagtgggatgaggaatatgacacaggtaagaggagg
aagattaggagctccaaaattgaatttggtggaccaaaccttttccaagattttgcaagc
aaaaagacaaaggttaagaaagcgaggcttgaacgctctagctctgcaaaccagcctttc
aggatattataa
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