Solanum pennellii: 107025826
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Entry
107025826 CDS
T04130
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
spen
Solanum pennellii
Pathway
spen03060
Protein export
spen04141
Protein processing in endoplasmic reticulum
spen04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
107025826
04141 Protein processing in endoplasmic reticulum
107025826
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107025826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107025826
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spen02044
]
107025826
Membrane trafficking [BR:
spen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
107025826
Secretion system [BR:
spen02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
107025826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
107025826
NCBI-ProteinID:
XP_015082073
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Position
7:complement(1585071..1592840)
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AA seq
536 aa
AA seq
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MLITVREISSSSLCFNSKQLHSLKVNRVTPICKASSLSFHKKSTAPSWNLGLFESTNSCD
NSVFDPLGINSGKSSWDNLVSLLSQTFESSSNTRKEKNSSARGLAAAIEDTSIDFGDFFK
GPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDENSILSTLDSFSGGGIGRLGIC
SLGIVPFINAQIVFQLLAQIYPKLQELQKREGEAGRKKVLQYTRYASVGFAVVQAIGQVL
FLRPYVNDFSTQWAISSVVLLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASF
GRTVAQAYQDGNYVGLVGILVSFFLLVLSIVYVQEAERKIPLNYASRYTGRTGGGLQKSA
YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGVGFLRNAAAGLNPGGSFYLPTNILLIAF
FNYYYTFLQLDPDDVSDQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLALLAAG
PAVIEQATHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDNKY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacagtcagagaaatttcttcttcttctctgtgcttcaattccaagcagcta
cactctttaaaggttaatagagtcaccccaatttgtaaagccagcagcctcagtttccat
aaaaaatccactgccccatcatggaatcttggtctttttgaatccacaaacagctgtgat
aattcagtatttgatccattgggtatcaattcaggtaaatcatcctgggataatttagtg
agcttgctctctcagacatttgaaagctcctcaaacactagaaaagagaaaaattcatca
gctagagggttggcagctgcaattgaagatactagcattgattttggggacttcttcaaa
ggcccgttaccaggaaagtttctaaagctattaggctttttggctttgtcacgactcggg
atctatataccgctcggtggagtaaatcgggaggcctttgttggcaatttagatgagaat
agtattttaagtactttggattccttttccggtggaggtataggtcgccttggtatatgc
tccctaggtattgttcccttcattaatgcacaaattgtgtttcaacttcttgctcaaatc
taccccaagttgcaagaacttcagaaaagagaaggtgaagctggaagaaagaaagttctc
cagtatactcgctatgcttctgttggatttgccgtagtacaggcaattggccaagtattg
ttccttcgcccttatgttaatgacttcagtacccagtgggcaatttcttccgttgtactt
ttgaccctcggctcagtatttacgacttatattggggagcgaatcactgatttaaaactt
ggaaatggtacatctcttttgatctttacaaatatcatttcctacttgccagcgtccttt
ggtaggacagtcgcccaggcctatcaagatggtaattatgttgggctcgttggcatccta
gtctcattctttctgctagtccttagcattgtatatgttcaggaagcagagaggaaaatt
ccgctaaattatgcatcaaggtatactggcagaacaggaggaggacttcaaaaatctgca
tacttaccatttaaagtgaacagttcaggagtaatgccgattattttctctacatcatca
ctagcccttcctggcactttggcacgtttcaccggtgtaggttttctgagaaacgctgca
gcaggtttaaaccctggaggttctttctatctgccgacaaacattttgttgattgccttc
ttcaattactattatacattcctgcaattggaccctgatgatgtcagtgatcagttgaaa
cgacaaggtgcctcaatcccacttgttcgaccgggtaaaagcacagcggcattcatcaaa
acggtactcagccggatatcagttcttggttcagcatttttggcacttctcgctgctggc
cctgctgtgattgaacaagccacacacctcactgctttccgaggctttgcaggcacgtca
gtgcttattcttgttggttgtgctacagacactgcaaggaaagtacaagcggagatcata
tcccaaaagtacaagaatattgagttttacgacattgataataaatattga
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