Solanum pennellii: 107025969
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Entry
107025969 CDS
T04130
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
spen
Solanum pennellii
Pathway
spen00450
Selenocompound metabolism
spen00970
Aminoacyl-tRNA biosynthesis
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
107025969
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107025969
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spen01007
]
107025969
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107025969
Enzymes [BR:
spen01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
107025969
Amino acid related enzymes [BR:
spen01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107025969
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107025969
Prokaryotic type
Other AARSs
107025969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
CoV_peptidase
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
107025969
NCBI-ProteinID:
XP_015082271
LinkDB
All DBs
Position
7:complement(4442597..4452250)
Genome browser
AA seq
812 aa
AA seq
DB search
MGDSSTAGNGDNHSPASPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARYC
RLRDYNIIYMCGTDEYGTATETKALEENCTPKQICDKYHAIHREVYKWFNISFDHFGRTS
TPQQTEVCQAIFKKLWENNWLSENTMQQPYCETCKKFLADRLVEGNCPTPGCNYDSARGD
QCEKCGKLLNPTELKDPRCKVCRNTPCIRDTDHLFLELPLLKDELEAYVNDLSVAGGWSQ
NAIHTTHAWLREGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTTEW
EKWWKNPENVELYQFMGKDNVPFHTVIFPSTLLGTRENWTLMKTISVTEYLNYEAGKFSK
SKGVGVFGNDAKETNIPVEVWRYYLLTNRPEVSDTLFSWVDLQSKLNSELLNNLGNFVNR
VLSFIAKDLASGYGSIIPNPEGAESHPLTKALGEKVGNYVEEYIEAMEKVKLKQGLKIAM
SISGEGNGYLQESQFWRLYKEDRPSCSIVMSTASGLVYLLACLLEPFMPSFSREVLKQLN
FPPETKPSLSDDRGDIEKSKRPWHILPAGHKIGIPTPLFKELKDEEVEFYREKFAGSQAD
RNLKAETEARKITDQLHKAKISDANKKKERATKSSEAKAKGSASVEAEISISRLDIRVGL
ITRAQKHPDADSLYVEEIDVGEAQPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPASMRGI
KSQAMVLAASNSDHTKVELVEPPKDAAIGERVTFPGFDGKADDVLNPKKKVWETLQVDLH
TNKELVACYKDLPLTTSVGVCKVTSISEGSIR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattcttccaccgccggcaacggagacaatcactcgccggcctctcccaaactt
ccgattcccggcaaaagaaacatcctcatcacaagcgctttgccgtatgtcaacaacgtt
cctcatctcggaaacatcatcggaagtgtgttgagtgcggatgtcttcgcgagatactgt
agacttcgggattataatatcatatacatgtgtggtactgatgaatatggcacagcaaca
gagactaaagccttggaagaaaattgtactcccaagcaaatttgtgacaaatatcatgca
atccatagagaagtgtataaatggtttaatataagctttgatcactttggacgcacatca
actccgcaacagaccgaagtttgtcaggcgatcttcaaaaaactctgggagaataattgg
ctctctgagaacaccatgcaacagccgtactgtgagacatgcaaaaagtttttggctgac
cggcttgtagagggtaactgtccgacaccaggttgcaactatgattctgcacgaggagat
caatgtgagaagtgtgggaagctcttaaatcccaccgaattgaaggatccaagatgcaag
gtttgccgtaacaccccatgcatccgagatacagatcatttgtttcttgagctccctttg
ctgaaggatgaattagaagcatacgtcaacgacctgtcagtggctggaggatggagtcag
aatgctatccacactacacatgcttggcttagagaaggactgaagccaaggtgtataact
agagatttgaaatggggggttccagttccacatgaaaaatataaggacaaggttttttac
gtgtggtttgatgctcctattggatatgtatctataacctcatgctacacaactgagtgg
gagaagtggtggaagaatccagagaatgtggagctctatcagtttatgggcaaagataat
gtgccttttcacactgtgattttcccatctacgcttcttggaactcgtgaaaactggact
cttatgaagactattagtgttacagaatacttgaactatgaagcaggcaaattctcaaag
agcaagggcgtaggagtatttggtaatgatgcaaaagagacaaacattcctgtagaagtt
tggagatattacttgctaacaaacaggccggaggtgtcagacactttgtttagttgggtg
gatttacaatcaaagctgaacagcgagttgctaaacaacttaggcaatttcgtcaataga
gtcctgagtttcattgcaaaagatctggcttcaggttatggttccataattcctaaccca
gaaggagctgaatcacaccctttaactaaggccttaggtgaaaaagttggaaattatgtg
gaagaatatatagaagccatggagaaggttaaattaaagcagggcttgaagattgctatg
tccatttctggagaaggaaacggttatttgcaagagagccaattctggagactttacaag
gaagataggccttcttgttccattgtgatgagcactgcttccggcctagtatatcttctt
gcatgtcttttagagccatttatgccatccttttcacgggaggtgcttaagcagcttaac
tttcctcctgaaacaaaaccttctctgtctgatgacagaggtgacatagaaaaaagcaaa
agaccatggcatatcctacctgcaggtcacaaaattggaataccaacaccattgttcaaa
gaactgaaagatgaagaagtagaattctacagagaaaagtttgctggaagtcaggcagat
aggaatttgaaggctgaaactgaggcaaggaagatcactgatcagttgcacaaagcaaaa
atatcagatgctaataagaagaaagaacgtgctacaaaatcttctgaagccaaagctaag
ggttcagcctctgttgaagcagaaatttcgattagcagacttgatattcgtgttggtctc
attacaagagcacagaagcatcccgatgctgattctttgtatgttgaagagattgatgtt
ggtgaagctcagcccagaactgtcgttagtggcctcgtaaaatatattcctctggaggaa
atgcagaatcgaaaggtctgtgttctatgcaacctaaaaccagccagcatgaggggcata
aaatcccaggcaatggttcttgctgcttctaatagtgatcacactaaggttgaactagtt
gagccacctaaagatgctgcaattggtgaacgagttacgttccctgggtttgatggcaag
gcggatgatgtcttgaatcctaagaagaaggtttgggaaactcttcaggtggatctgcac
acaaataaggagttggttgcttgctataaagatttgccactcaccacttctgttggtgtt
tgcaaggtcacatccatttctgaaggatcgattaggtaa
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