Solanum pennellii: 107025974
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Entry
107025974 CDS
T04130
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107025974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107025974
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107025974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
107025974
NCBI-ProteinID:
XP_015082280
LinkDB
All DBs
Position
7:3148442..3164310
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AA seq
1481 aa
AA seq
DB search
MSGDNEIVMRDVTNAGLVVSDRIGRDVASQIDLEDALEASRYASHPYTAQPREWPPLVEV
VDSWELPSVLIERYNASSGEGTALCGVFPEIRRAWASVDNTLFLWRFDKWDGHCPEYSGD
EQAICVVGLAKVKPGIFVEAIQYLLILATPVELILVGVCCSASSDGTDPYAEVSLQPLPD
YTIPSDGVTMTCISSTDRGHIFLAGRDGHIYELQYSTGSGWQKRCRKLCLTAGLGSVISR
WVVPNVFKFGAVDPIVEMVIDNERHILYARTEEMKILMFSLGENGAGPLKKVAEERNLIN
QRDSYGGRQPAGSRAPRSAKTTIVSISPLSVLESKWLHLVAVLSDGRRMYLSTSSSGGSN
STAGSFGGLNHQKPNCLKVVTTRPAPPLGAGSGLPFGAVSLASRSQSEDLSLKIESAYYS
AGTLVLSDSSPPTVSSLLIVNRDSSSQSSSSSLGAGARSSRPLRELVSSLPIEGRMLFVA
DVLPLPDTAAAVQSLYLQLEFGYDNSGESCERTSGKLWARGDLSTQHILPRRRIVIFSTM
GMMEVVFNRPVDVLRRLLESNSPRSLLEDFFSRFGSGESAAMCLMLAARIIYTETLVSNV
AAERAAEAFEDPRLVGVPQLEGSGAFSNTRAPAGGFSMGQVVQEAEPVFSGAHEGLCLCS
SRLLLPLWELPVFITKGGITSSDAFDNVVIVCRLPGETMQILEDKIRSLEKFLRSRRNQR
RGLYGCVAGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYARNVESNEGGSSNKRQRLPY
SSAELAAMEVRAMECIRQLLLRCGEAIFLLQLLTQHHVTRLIQNFEANIKQALVQLTFHQ
LVCSEEGDRLATRLVSALMEHYTGPDGRGTVDDISGRLREGCPSYYKESDYKFYLAVESL
DRAAATLDAEERENLAREAFNYLSKVPESADLRTVCKRFEDLRFYEAVVLLPLQKAQALD
PAGDAFNEQIDAGIRDLALAQREQCYEIIFSALHSLKGEASKREFGSPIRPIAQSTLDQT
SRKEFICQIVQLGVQSSDRIFHLKLYQTLIDLGLEDELLEYGGPDLVPFLQNSGREPTNE
VRAVSAVASPTSPLAHARVPALSNQAKYFELLARYYVLKRQHVLAAHVLVRLAERRSTDA
GDAPSLEQRRQYLSNAVLQAKSAHDTDGMSGSARGALDNGLLDLLEGKLAVLQFQIKIKD
ELEAMSSRLESSTSTSESGSGETSPHMSNILREKAKELSMELKSITQLYNDYAVPYEIWE
ICLEMLYFASYSGDADSSILRETWARLIDQALMRGGIAEACAVLKRVGTHVYPGDGAVLP
FDTLCLHLEKAALEQVVSGAESVGDEDIPRALLAACKGAVEPVLNTYDQLLSSGAVLPTA
NLRLRLLRSVLALLREWALSVFAHGMGTSVTGASLILGGTLSLGQTAVGNQGVRDKITSA
ANRYMTEVRRLPLPQNQTEAVYRGFRELEESLLSPFPFERF
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggacaatgagattgtaatgcgtgatgttactaatgccggacttgtagttagt
gaccgcattggccgtgatgtagcttctcaaatcgatcttgaagatgcattggaagcttct
agatatgctagtcatccttatactgctcaaccccgtgagtggcctcctttagtggaagtc
gtggactcttgggagttgccttctgtattgattgagagatataatgcatccagtggagaa
ggaactgcattatgtggagtatttcctgaaattcgcagagcttgggcatcagtggacaac
acattgtttctttggcggttcgataagtgggatggtcactgtcctgaatatagtggagat
gaacaagctatatgtgttgttggcctagccaaagtcaaacctggaattttcgtggaggcc
atccagtatcttctgatcttggcaactcctgttgagttgatccttgtaggtgtatgttgt
tctgcaagcagtgacggaactgatccatacgctgaggtgtcacttcagccattaccagat
tatacaattccatctgatggagtgaccatgacatgtataagttccacagacagaggtcac
attttccttgcaggccgtgatggccacatttatgaattgcagtactcaactggttcgggg
tggcagaagcgatgccgcaagctctgtctaactgcaggtctcggaagtgtcatatcaagg
tgggtggtgccaaatgttttcaagtttggagccgtagatcccattgttgaaatggtcatt
gataatgagagacacatcttatatgcacgtaccgaagagatgaaaattctgatgttttct
cttggagaaaatggggctggaccccttaaaaaagtagcagaagagagaaatttgataaat
cagagggattcttatggtggtaggcaaccagctggttcaagggctcctagatcagccaaa
acaaccattgtttccatctcaccgttatctgtcttagaatcaaaatggctacatcttgtt
gctgtgctatcagatggcagaagaatgtatctttccacgtcttcttctggtggaagcaat
agtactgctggaagtttcggtggtcttaatcatcaaaagccaaactgcttaaaagttgta
acgactaggccagctcctcctctaggggcaggtagtgggcttccatttggagctgtatct
cttgctagtagatcacagagtgaagatctgtcactgaagatagaatcagcctattattct
gctgggactcttgtcctttctgattcatctccaccgactgtttcttctcttcttattgta
aatcgggattcaagttctcaatcttcttcaagtagtttgggagcaggtgctaggagttct
cgcccactccgtgaattggtgtcatccctgcccattgaaggaaggatgcttttcgtggca
gatgttctacccctaccagatacagcagccgcggtgcagtcactttatttacagctggag
ttcggctatgataactcaggggaatcctgtgaaagaacttcgggtaaactttgggctaga
ggtgatctttcaacccaacatatattaccaagaaggagaatcgtcatattcagcactatg
ggtatgatggaagtagtttttaacagaccagtcgatgtactcaggagactattggaatcc
aattcgcctaggtcattattagaggatttcttcagtcgttttggatctggagagtctgct
gccatgtgtttaatgcttgctgcgaggataatctatactgagaccttagtaagtaatgtt
gctgctgagagggcagctgaagcatttgaggatccaagacttgttggagtaccacagcta
gaaggtagtggtgcattttcaaatactagagctccagctggaggatttagcatgggccag
gttgtgcaggaagctgagcctgttttctccggtgctcatgaaggtctttgcttatgctca
tcaaggttacttctacctttgtgggagcttcctgttttcatcactaaaggaggcataact
tcttcagacgcatttgacaatgtagtaattgtctgccgacttcctggtgagaccatgcaa
atcctggaagacaagatacgttctttagagaagttcctgagatctaggaggaaccagaga
aggggactttatggttgtgttgctggcttaggtgacttgacaggctcaattttgattgga
actggctcagatatgggggctggtgacagaagtatggtaagaaatctatttggatcttat
gctcgcaatgtcgagtccaatgaaggtggatcttcaaacaaaaggcaacgacttccttat
agttctgctgaacttgctgccatggaggttagagcaatggagtgtatcaggcaattgctc
cttagatgtggcgaagccatattcttgctgcaacttcttacacaacatcatgtgacacgc
ttgattcaaaattttgaagctaatatcaagcaggccctagttcagttgacattccatcaa
ctagtttgttcagaagagggagatagacttgctacgagacttgtatctgccctcatggag
cattacactggtccagatggcaggggaactgttgacgacataagtggtagactacgagag
ggttgcccaagttattacaaagaatctgattacaagttctacttagcagttgaatctctt
gatagagctgctgctacattagatgcagaggagagagaaaaccttgcgagagaggcattc
aactacctaagcaaagttccagagtctgcagatctgcggactgtatgtaaacgttttgaa
gatctgagattttatgaagctgtggtcctattacctctgcaaaaggcacaagctcttgac
cctgctggtgatgcttttaatgagcaaatagatgctggaattcgagatcttgcacttgct
caacgtgagcagtgctatgagattattttcagcgccttgcattctttaaaaggtgaagct
tcaaagagggaatttggatctcctatcagacctattgctcagtctactcttgatcaaact
tctcggaaagagttcatttgccagattgtccaacttggtgtgcaatcttcagacagaatt
tttcatctgaagctgtatcaaaccttaatcgatttgggcctggaagatgaactacttgaa
tatggtggccctgatttggtaccttttctgcaaaattctggccgtgaacctacaaatgag
gttcgtgctgtctctgcagtggcatctccaacttcaccattggctcatgctagagtacct
gcactatccaaccaagccaaatattttgagcttttggctcgttattatgttttgaagaga
caacacgttcttgcagcccatgttttggtgaggctggcagaaaggcgctccactgatgca
ggggatgctcctagtttagaacaaaggcggcaatacttgagtaatgctgttttgcaagca
aagagtgcccatgacactgatggtatgagtggttctgcgcggggtgctcttgataatggg
ctgcttgatttgctcgaaggaaagcttgctgttcttcagtttcaaattaaaattaaagat
gaactggaggctatgtcttccaggttagagtcatctacaagcacatctgaatctggttct
ggtgaaacatcaccccatatgagtaatattcttcgagaaaaagccaaggagctatcgatg
gaattgaagagcattacacagttgtataatgactatgctgttccttatgagatatgggag
atatgcctggagatgttgtacttcgctagctactccggtgatgctgatagcagcatactg
cgagagacatgggctaggctcattgatcaagctcttatgaggggtgggattgctgaagct
tgtgctgtactgaagagggttggtacccatgtgtatcccggagatggagctgttttacca
tttgatactctctgtcttcaccttgaaaaggctgcactggaacaagtggtttctggtgct
gaatctgttggggatgaagatattcctagggctcttttagctgcttgcaagggtgcagta
gagcctgtattaaatacttatgaccagctgttatcaagtggggcagtgttgccaactgcg
aatcttagattgcgtctcctgcgctccgtactggctttacttcgtgaatgggcactttct
gtcttcgcacatggaatgggtacaagtgttactggagcctctctgattcttggtggaact
ttatcattaggacagactgcagttggtaatcaaggtgttcgcgataaaataacaagtgca
gcaaatcgatatatgacagaagtgcgaagattacctcttccacaaaatcaaactgaagct
gtttatcgaggttttcgtgaacttgaagaatcattgttaagtccattcccttttgaacgg
ttttga
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integrated database retrieval system
