Solanum pennellii: 107025982
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Entry
107025982 CDS
T04130
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107025982
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
107025982
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA_15
AAA_22
AAA
Rad17
RsgA_GTPase
AAA_16
AAA_29
AAA_23
NACHT
nSTAND3
Fer4_2
LdpA_Fe-S-bd
DUF5906
NPHP3_N
TsaE
Fer4_9
AAA_33
Fer4_21
Fer4_10
AAA_5
SRP54
Fer4_4
Thymidylate_kin
ORC-CDC6-like
Fer4_16
AAA_7
Fer4_8
Fer4_7
Fer4_17
DLIC
Motif
Other DBs
NCBI-GeneID:
107025982
NCBI-ProteinID:
XP_015082286
UniProt:
A0ABM1H9C4
LinkDB
All DBs
Position
7:3417249..3424000
Genome browser
AA seq
605 aa
AA seq
DB search
MSDRLTRIAIVSDDKCKPKKCRQECKKSCPVVKTGKLCIEVTVGSKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFTNPPDWQEILTHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLDQKDERDVKEKLCVDLELNQVLDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQEAAEEIESYARYRYPTMTKTQG
NFKLKVSEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDVVEGSDIEMPEFNVSYKPQ
KISPKFQSTVRHLLHQKIRDSYQHPQFCSDVMKPLQIEQLMDQEVVNLSGGELQRVALAL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGTPSIDCVANAPQSLLTGMNLFLSHLNITFRRDPTNYRPRINKLESTKDREQKSAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagattgacacgtatcgccatcgttagcgacgacaagtgcaagccgaagaag
tgccgccaagaatgcaagaagagctgcccagttgttaaaactggtaagttatgtatagag
gtcactgtagggtcgaagattgctttcatctcagaggagctgtgtattggatgtggtatt
tgtgtaaagaaatgcccatttgaagcaattcagatcatcaatctgccaaaagatctagac
aaggatacaacccatcgttatggtcccaacactttcaaattgcataggttacctgtccct
aggccaggacaggttcttggtctggttggcacaaatggtattggaaagtcaactgccctg
aaagttttggctggaaaattgaaaccaaacttgggacgcttcactaaccctcctgattgg
caagagatcttgactcactttcgaggatccgaattgcagaactacttcactcgcattctg
gaagataacttaaaggcaattatcaagcctcagtatgttgaccatattccaaaggcagtt
caaggaaatgttggacaagtgcttgaccaaaaagatgagagagacgtgaaggaaaaactc
tgtgttgatctagagctgaatcaggttttggatcgtaatgtaggtgatctatctggtgga
gagcttcagaggtttgctattgctgttgttgccatacaaaatgcagagatatacatgttt
gatgagccttcgagttaccttgatgtgaagcaaaggcttaaagctgcccaagttgtcaga
tccttgcttcgaccaaatagctatgtcatcgttgtggagcatgatcttagtgtgcttgat
tatttgtcggatttcatttgctgcttatatggaaagcccggtgcatacggagttgtgacc
ctacccttctcagtcagggaaggaattaatatatttttggctgggtttgtgcctacagaa
aatctacgttttcgtgacgagtctcttacttttaaggttgctgagaccccacaagaggct
gctgaggaaattgaatcatatgcacgttacagatatcctaccatgactaagactcagggt
aatttcaagcttaaggtttctgagggtgaatttactgattcacagattgttgtgatgctt
ggtgagaatgggactgggaagactaccttcattcgtatgctggctggtctattaaagcct
gacgtggtggaaggatctgatattgagatgccagagttcaatgtttcatacaagccccag
aaaattagtccaaaatttcaatccaccgtgagacatttgctacatcaaaaaatacgtgat
tcttatcaacacccccagttttgttcagatgtgatgaagcctctccaaattgagcaattg
atggaccaagaagttgtgaatctttctggtggtgagttgcaaagagttgccttagccctg
tgccttggaaagcccgctgatatatatctgatcgatgagccaagtgcctatcttgattct
gagcagcgtattgtagcttctaaagtcatcaagagattcattcttcacgcgaagaagact
gcatttgttgtagagcatgactttataatggcaacttacctggcagatagagtcattgta
tatgaggggacgccttccatagattgtgttgcaaatgcacctcaatcactgttgactgga
atgaacttatttttatcacatctgaacattacgtttcgaagggacccaactaattaccgt
ccaaggatcaacaaactagaatcaaccaaggatagggagcagaagtcagctggatcttac
tattatttggatgattaa
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