Solanum pennellii: 107026018
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Entry
107026018 CDS
T04130
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107026018
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
90S particles
Other 90S particles
107026018
Pre-60S particles
Other pre-60S particles
107026018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_N
Maestro_HEAT
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
107026018
NCBI-ProteinID:
XP_015082328
LinkDB
All DBs
Position
7:complement(65987611..66002120)
Genome browser
AA seq
1293 aa
AA seq
DB search
MMEGIEMEQPFPDNSSDDFCNIVLSQFCDSNNEHHVHICTAIGTMSQELREQSFPLTPIA
YFGATCSSLQTLYTAAPEGPPSHLVDALSTILSLVIPRINQAMFRKKYEYLSDVMIQLLG
LKSIGVEGIVSCLKCVVRLLIVGAKGNWSDVAQLYGVFIGYITDDRQKVRKMSHNCLRDL
LQNFQSSSVLAPLLAPASEAITNLFERSLLLAGGTTVNASERPKGAQEVLHVLDALKLCL
PFMSSKYLNSTLKYFKSLLELHQPLVNRRITDGLNALCIHPTAEVSPEVLLDLLASFATS
VSANESSADTLTFTARLLGIGMRKVYSINRQLCVVKLPVVFNSLSDVLGSEHEEAIRAAL
EALKSLIHECIDENLIKQGVDYIISSNTDTKKSGPTIIEKICATIESLLTYHYAAVWDMT
FQVVVAMFDKLGCYSSQLLKGTLQSLADMEKLPDEDFPFRRQLHECVGSAVGAMGPESFL
TLLPLKLDAQDLSESNIWLFPILKQNIVGAHLSFFTNSILPMVGAMKQRSAMLELEGKIY
SARTIDGIVYSLWSLLPSFCNYPVDTAESFKDLEKVFRKALHEEPDVCGIICSSLQILIQ
QNDSILKGKVDLSDTETTVPRERAIARYNQQVADNNLNTLSLSAQKLLPVLYDVFLKSSK
DTGGFLQRTIGVLASIADKVREKSLDQTKGKRRVVRVLFTKIMQRLLEVTQEAGEAGKDK
KSHSMQIDDSSSKSSLSERAQLFDLAVSFLPGLNAQEIGVLFGALKPALKDEEGLIQKKA
YKVLSMILQDCDEFISTKTEELLNLMIEALPACHFPAKRHRLDCLYFLIVHVTKDESEQR
RRDSITSFMTEILLALKEANKKTRNRAYEILVKIGHACADEDKGGRKEHLHQFFNMIAGG
LAGETPHMISAAVKGLARLAYEFSDLVSAAYSVLPSTFLLLKRENKEIIKANLGLLKVLV
TKSTADGLQAHLRNMVEALLGWQNSTKNHFKAKVKLLIEMLIKKCGMDAVKEVMPEEHMK
LLTNIRKIKERRERSLASNSEESRSRMTKATTSRLSRWNHTKIFSEFDDGESENSDAEYM
DTKTTAGRRSKATLVSDSKASLLRSKKTRKAAKSLQEDLFDQLDDDPLDLLDQKKTRSAL
RASGNLKRKSESEDEAEIDSEGRLIIHDGDKKQKRVKPASDDLDVRSKAGSRFSESSRNT
QKRRRTSESGWAYTGTEYASKKAGGDVKKKDRLEPYAYWPLDRKMMSRRPEHRAAARKGM
SSIVKLTKKLEGKSASSVLSAKRSKTKKKRGHK
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggggattgaaatggaacagcctttcccggataactcttcagatgacttctgc
aatatagtattatcccaattttgcgattccaacaatgagcaccacgtccacatctgcacc
gccattggtacaatgtcacaggagcttagagaacagagttttcctctcacgccaatagct
tacttcggtgctacttgttcctcactccaaaccttatatactgctgcccctgaaggaccg
ccatcccatcttgttgatgctctttccacgattttgtctctcgttattcctagaataaac
caagctatgttcaggaagaaatatgaatatttatctgatgttatgattcaactacttgga
ttgaagtctattggtgttgaagggattgtttcgtgcttgaagtgtgttgtgcgcttgcta
attgtgggagccaaggggaactggtctgatgttgctcaactttatggtgtgtttattggg
tatataacagatgatcggcaaaaggtgaggaagatgtcacataattgtctacgtgatctc
ctgcaaaactttcagtcatcatctgtgcttgctcctctattggcacctgctagtgaagca
atcacaaatctctttgaaaggtcccttcttcttgcaggaggaacaactgtaaatgcctct
gaaagacccaaaggagcacaagaagtcttacacgtgctggatgccctgaaactttgtctt
ccttttatgtcttcaaagtacttgaatagcactttgaagtacttcaaatctttactggaa
ttgcatcaacctcttgttaataggcgcattacagatggtttgaatgctctttgtatccat
ccaacagcagaagtatctccagaagtgcttctggacctcttggcttcatttgcaacttca
gtttctgcaaatgagtcatctgctgatactttgacattcacagctcgcttgcttggcatt
gggatgagaaaagtatattcaattaacaggcagttatgtgtggttaagctccctgtggtg
ttcaactctcttagtgatgtactaggttctgaacatgaggaagctataagggctgcgctg
gaggcactcaagagcttaatacatgaatgcattgatgaaaacttgatcaaacagggtgtg
gattacataattagttcgaatactgatacgaaaaaatctggaccaactatcattgagaaa
atctgtgccacaattgagagcttgcttacctatcactatgcagcagtctgggacatgaca
tttcaagtggtggttgccatgtttgataagctaggttgctattcttctcaacttctgaag
ggaacactacagagtttggctgatatggaaaagttgccagatgaagacttccctttccgt
agacagctgcacgaatgtgttggatcagctgttggtgcaatgggacctgaatcttttctt
actcttcttcctcttaaactggatgcacaagatctgtcagagtccaacatctggcttttc
ccaattctaaagcaaaatattgttggtgcgcatttaagtttctttaccaactcaattttg
ccaatggttggagctatgaagcagaggtctgcaatgcttgagctcgagggaaagatatat
tcagcgagaactattgatggaattgtgtactcattgtggtcactgttaccctcattttgc
aattaccctgtcgacactgctgaaagcttcaaggatctggagaaggtattccgcaaagct
ctacatgaagagcctgatgtttgtgggataatatgctccagtttgcagatcctcattcag
cagaatgatagcattttaaaagggaaagttgatctgtctgatactgaaacaaccgttccc
agagaacgagccattgcacggtacaaccagcaagttgcagacaataacttgaacacattg
agcctttctgctcagaaactgctacctgttctctatgatgtcttcttgaaatcctctaaa
gatactggtggatttttgcagagaacaattggtgtattggcctctattgctgacaaagtt
agagaaaagagtctcgaccaaaccaaaggaaaaagaagggtggtaagagtgctatttaca
aaaatcatgcagaggcttttggaggtgacccaagaagctggggaggcagggaaggacaaa
aaatcgcattcaatgcagattgatgactcatccagtaaaagttctttgtcagagagggca
cagttatttgatctggcagtttcattcttgcctggtttaaacgctcaagaaattggtgtg
ctgtttggtgctttaaagcctgctttaaaggatgaggaaggcttgatccagaagaaggca
tataaagttctctccatgatccttcaggactgtgatgaatttatttcaacgaagaccgaa
gagttgcttaatttgatgattgaagcactacctgcatgtcattttccagccaagcgtcac
agacttgactgcctatactttttgattgtccatgttacgaaggatgaatcagaacagagg
aggcgtgacagtattacttcttttatgactgaaattttgcttgcactcaaagaggctaac
aagaaaacaaggaaccgagcgtacgagattcttgtcaagattggccatgcttgtgcagat
gaagacaaaggtggcagaaaggagcacctgcatcagttttttaatatgattgctgggggt
cttgccggggaaacacctcatatgatcagtgctgcggttaaaggcctcgctcgactggct
tatgaattttcagaccttgtttctgctgcttacagtgtcctaccatcaacatttcttctc
cttaaaagagagaacaaagaaataattaaggctaatttagggctgttgaaggtactggtc
acaaaatcgacggccgatggattgcaagcacatttaaggaacatggtagaggcccttctt
ggttggcaaaatagtaccaagaaccatttcaaagccaaggttaaactgcttattgaaatg
cttatcaagaagtgtggaatggatgctgtaaaagaggtgatgcctgaagagcacatgaaa
ctccttactaacataagaaagatcaaggagcgaagagagaggagcctcgcctcgaattct
gaggaaagcagatcccgtatgacaaaagcaacgacatcaaggctaagcagatggaatcat
acaaaaatattttctgagtttgatgatggagaatctgagaacagtgatgcagaatatatg
gacacgaaaactactgctggtcgtaggagcaaggctacattagtatcagactccaaagca
tctttattacggtccaagaaaacacggaaagcagccaagagtttgcaggaagatctgttt
gatcaattagatgatgatccacttgacttacttgaccagaagaagaccaggtcagctctt
agagcatctggcaatctcaagaggaagtctgaatcagaagatgaagcagaaatagattct
gaaggccgtttgattattcacgatggagataagaagcaaaaaagagttaagccagcttct
gatgatttagatgtaagaagcaaagcagggagtcgcttttcagagagctcaaggaatact
cagaaacggaggagaacatctgaatcaggatgggcttacactggaacagagtatgcgagc
aagaaggcaggtggtgatgtcaagaagaaagacagacttgagccatatgcctactggccc
cttgaccgcaagatgatgagccggaggcctgaacatcgggcagcagcacgaaaaggaatg
tcaagcattgtgaagctaacaaagaagcttgaaggcaagagtgcatcatctgtgctgtcc
gcgaagagatctaagactaaaaaaaaacgaggtcataaatag
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