Solanum pennellii: 107026044
Help
Entry
107026044 CDS
T04130
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107026044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107026044
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107026044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107026044
NCBI-ProteinID:
XP_015082358
LinkDB
All DBs
Position
7:69857111..69869453
Genome browser
AA seq
474 aa
AA seq
DB search
MQSDLGKLFIGGISWDTNEERLKEYFSTYGEVLEAVIMKDRTTGRARGFGFIVFADPAVA
DRVIKEKHNIDGRMVEAKKAVPRDDQSTISRSSPSIQGSPGPGRTRKIFVGGLASTVTET
DFKEYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLKPFHELNGKMVEVKR
AVPKELSPGPRLGGFNHPLSRINNFLNGYTQGYSPNTVAGYGVRMDGRFSPIAGGRSGFA
PFGSGYGMGLNFEPGLSPGYGGSANFNSNLSYGRGLNPYYVNSSSRVGGPIGFDGVNGGS
SSFFSSATRNLWGSGGLGYGTNSTSSSTFAVAGNGNTGAGNFSNTGVWGSSSISPQGRGN
VSNQSGNLGYGGDDSLYGLTGGYGRNVTSSGAPTSSYPASNGSYDGPLADFYSGGLGYSD
STWRSANSERDGSGSIGYGLGNAPSDMPPKNSASYVGSYGVGKRQSNSADSSCF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgatcttgggaagttattcattggtggaatttcatgggacacaaatgaagag
cgtctgaaggagtattttagtacttatggggaggttttagaggctgtaattatgaaggat
aggactactggacgtgcccgtggttttggttttattgtctttgctgatcctgctgttgct
gatagggtaatcaaggagaaacacaacattgatggcaggatggttgaagcaaagaaggct
gttcctagggatgaccagagcacaataagtagaagcagtcctagcattcagggttctcct
ggtccaggacgtacaagaaaaatatttgttggaggtttagcatccacagtaactgagact
gactttaaggagtactttgagcaattcggaacaatcacagatgtagtagttatgtacgac
cataacactcagagaccaagaggctttgggttcataacttatgattcagaggatgcagtg
gataaagtattgcttaagcccttccatgaactgaatggtaaaatggtcgaggtcaaacgt
gcagtccccaaagagttatcaccaggtccaagacttggcgggttcaaccatccattaagt
aggatcaataacttccttaatggatacacacaaggatactctccgaatacagttgcagga
tatggagtcaggatggatggtagatttagccccattgctggaggtaggagtggttttgct
ccatttggttctggttatggaatggggcttaactttgaaccagggttaagcccaggatat
gggggaagtgcaaactttaacagcaacttgagctatggacggggactgaacccttattat
gttaatagttcaagcagagttggtggtcctattggatttgatggagtaaatggaggaagt
agttcattcttcagctcagcaactcggaatttgtggggaagtgggggtttgggttatgga
acgaactccacaagctctagcacctttgcagtagctggaaatgggaacaccggggctgga
aactttagcaacactggagtttggggttcatcttcaatttcccctcaaggtagaggaaat
gtttctaaccaaagtggaaatcttggttatgggggtgatgatagtttatatgggttgact
ggaggctatggaagaaatgttacatcaagtggggctcctacctcatcatatcctgcatct
aatggtagctatgatgggcctttagctgatttttacagtggtggtttgggatatagtgat
tccacttggcgctctgcaaattctgagcgagatggatctggttcaattggttatggactc
ggcaatgcaccctcagacatgccacctaaaaattctgctagttatgttggcagttatggt
gttggtaaaagacagtcaaacagcgctgattctagctgtttctga
DBGET
integrated database retrieval system
