Solanum pennellii: 107026090
Help
Entry
107026090 CDS
T04130
Name
(RefSeq) WD repeat-containing protein 11 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107026090
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spen03037
]
107026090
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Others
Others
107026090
Cilium and associated proteins [BR:
spen03037
]
Other cilia and associated proteins
Other cilium assembly proteins
107026090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
Beta-prop_WDR11_1st
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
TPR_GEMI5
Beta-prop_RIG_1st
ELYS
Motif
Other DBs
NCBI-GeneID:
107026090
NCBI-ProteinID:
XP_015082427
UniProt:
A0ABM1H9Q5
LinkDB
All DBs
Position
7:complement(3067557..3089363)
Genome browser
AA seq
1314 aa
AA seq
DB search
MSIQIQKPPNESWDCMLPGPPSRNNGGSADISPAGLFAYASGSSVSVVETHSMQLVTTIP
LPPPSSSTTSLSPFITSVKWSPQNLPHLIDVPQHHLLLAVGDRQGRICLLDFRSKSPTIF
FDTGSGSKLGIQDLCWVQTGPDSWILAALCGPSLLSLFNTSTGRCFFKYDAAPEYFSCLR
RDPFDSRHFCALGLKGFLLSVTALGDTENDVVLKELQIRTDTTELQKLERDSSTGGNGAP
ASATFPTYISKFAFSPHWMHLIFVAFPRELVVFDLQYETALFSSGLPRGCGKFLEVLPDS
NIEVLYCAHLDGKLSTWRRKDGEQVHTMCAMEELMPSIGTTVPSPSILAAVISHSDAAFQ
TIGKLYSDAHHSADVDFDNPFDFCDESLVLSKTRLITISDDGKVWKWLLTAEGSVDIQKD
MSNPDIVAEASKSVPSEIPMGHNSETSTVPLSTDANRSRTCLSKSTTSLDEVSFKISLVG
QLHLLSSAVTMLAVPSPSLTATLGRGGNSPAVAVPLVAVGTQSGTIDVIDVSANAVSVSF
AVHNSVVRGLRWLGNSRLVSFSYSQGTEKAGGYINRLVVTCLRSGLNRPFRVLQKPERAP
IRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRPLPKDRP
AVASTETSSPTKEAVAAADAKGAGTDGSQDEFSESFSFALVNGALGVFEVHGRRIRDFRP
KWPSSSFVSSEGLVTAMAYRLPHVVMGDRSGNIRWWDVTTGQSSSFNTHREGIRRIKFSP
VVPGDRSRGRIAVLFYDNTFSVFDLDSPDPLANSLLQPQFPGTLVLELDWLPLRSDKNDP
LVLCIAGADSSFRLVEVNMSDNKMIHGSQVRPVKERFRPVPLCSPILLPTPHALALRTIL
QLGVKPSWFNTWSTTTDDANHQVPGTPTSGDLRNHMIESPRIGDTVVPEMLLKVLEPYRR
EGCILNDEMVRLYAGLVDKGSAVRFAFAAAIFGEPMEALFWLQLPRALNYWMKRLTNKSP
ARVPQSASTSELDEVSMLNRISSKGKSGTETGKNNSLGNGQLQLMAFEQEELWGRANEQI
PWHEKLEGEEAIQNRVHELVSIGNLEAAVSLLLSTPPESSYFSANALRAVALSSAVSTSL
LELAVKVVAANMVRTDRSLSGTHLLCAVGRHQEACSQLQDAGCWTDAATLAATHLKGTDY
ARVLLRWAQHVLHSEHNIWRALILYVAAGALPEALASLRGAQQPDTAAMFILACQEIHSE
YLSSLDDELRSSDKLVNLPGLNPESEDVHAVGEYYGQYQRKLVHLCMDSQPFSD
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatacaaattcaaaagccaccaaatgagtcatgggactgtatgttacctggccca
ccttcccggaacaacggtggatccgctgatatttctcccgccggcctatttgcttacgcc
tccggtagctctgtatccgtcgtcgaaactcattctatgcaactcgttactactatccct
cttccaccaccgtcctcttctactacctcattgtcccctttcatcacttccgtcaagtgg
tccccacagaatcttccgcatttaatcgacgttcctcaacatcatcttcttctcgctgtc
ggtgatcgtcaaggacgaatttgtttacttgatttccggtctaaatctccgacgattttc
tttgatactggttcaggttctaaacttgggattcaggatctatgttgggtacaaactgga
ccggattcatggatcttagctgctttatgtggaccttcgttgctttctctgtttaatact
tccacgggtcggtgtttcttcaaatatgatgctgcgccggagtatttctcgtgtctacgt
cgtgatccgtttgattcgcggcatttttgtgccctaggacttaaaggatttttgctttca
gtgactgcattgggagatacagagaatgatgtggtgcttaaggaacttcaaattcgtacg
gatactactgaattgcagaaactagagagggattcatcaactggaggtaatggagctccg
gcatcagctacatttccgacgtacatttcgaaatttgcattttcaccacactggatgcat
ttgatcttcgtggcgtttccgagggaattggtagtgtttgatctgcagtatgagacagca
ctgttctcgtctgggctgccccggggatgtgggaagtttctggaggtgttacctgactcg
aatattgaagttctgtactgtgctcatcttgatggaaagctcagtacttggcggcggaaa
gacggagagcaagtgcacacaatgtgtgcgatggaagaattgatgccctcaatagggaca
accgttccttccccctcaattcttgcagctgttatctcccattcagatgccgcctttcaa
actattggcaagctttattcagatgcacatcattcagctgatgtggattttgataatcca
tttgatttttgtgatgaatcccttgttttatctaagacgcgtttaatcaccatttctgat
gatgggaaagtatggaaatggctcctgactgctgaaggatccgtagatattcagaaggac
atgtcaaatccagatattgttgcagaagccagtaagtctgtaccttcagagattcccatg
ggtcacaactctgagactagcacagttccactgtcaactgatgcaaatagaagcaggacc
tgtctgtcaaaatccactacaagcctagatgaggtgtcctttaagattagtctagttggg
cagcttcatcttctttcttcagcggtgactatgttggctgtaccttccccttctttgact
gctactttgggacgtggaggaaactctccagctgtcgctgttccgcttgttgctgtggga
actcaaagtggtacaatagacgtgattgatgtctctgccaacgctgtcagtgttagcttt
gcagtccataacagtgttgtcaggggattaaggtggcttggaaattcccggctggtttct
ttctcgtactcacagggtacagaaaaagcaggtggctacatcaataggctcgttgtgaca
tgtcttcgaagtggactcaatcgaccatttcgtgttctgcagaaaccagagcgagcacct
attagagctttaagggcttcatcttccggcaggtacctattgattttgtttcgtgatgca
ccagtagaagtttgggctatgactaagacaccaatcatgcttagatcactagctctcccg
ttcactgtgctagaatggactcttccaacagtaccgcggccattgcctaaagatcgtcct
gccgtagcgtcaacagagacatcctccccaacaaaagaagcagttgcagcagcagatgct
aaaggagctgggacagatggatctcaagatgaattttcagaaagtttctcttttgcacta
gtcaatggtgcacttggagtttttgaggttcatggtcgaaggatccgtgactttagacca
aagtggccttcatcttcatttgtttcatctgagggattggtgacggcaatggcctatcgt
ctgcctcatgtggttatgggcgacaggtcaggaaacattcgctggtgggatgttactact
ggacagtcgtcctcatttaacacccatagggaaggcattcgtagaatcaagttctcacca
gttgttcctggagatcgtagtcgtgggcgtattgccgttctgttttatgataatacattt
tcggtatttgatctggactcacctgatccattagccaattcacttttacaacctcaattt
cctggaactcttgtattggagcttgattggttgcctttgcgatcagataagaatgatcca
ctggtgctatgcatcgctggagctgatagcagctttcgccttgttgaagtcaatatgagt
gacaataaaatgatccatggttcccaagttcgaccagtcaaagaaagatttcgaccagtg
cctttgtgttctcccatattactacccacgccacatgccctggcattacgtacaatctta
cagttaggtgtgaagccatcatggtttaatacatggagtacaaccacagatgacgcgaac
caccaagttcctggaactccgacatctggagatcttcgtaaccacatgattgaatcaccc
cgcattggtgatactgtagtgcctgagatgcttctcaaagtactggagccttatcgcaga
gaagggtgcatacttaatgatgagatggttagactctatgctggtctagtggataaaggt
tctgcagtaaggtttgcctttgctgctgctatatttggggaacccatggaagctcttttc
tggctgcaattaccgcgagctttaaactactggatgaaaagattgactaacaagtctcca
gcaagagtccctcaatcagcttccacgtcagaacttgatgaagtatctatgttaaatagg
atatcatcaaagggaaagtcggggaccgaaacggggaaaaataattctttgggaaatggt
caacttcagctgatggcctttgaacaagaagagttgtgggggcgtgctaatgagcagatt
ccttggcatgaaaagctggaaggagaagaggcaattcaaaaccgtgtgcatgaattagta
tcgattggaaacctagaagctgctgtcagcttactgctctccacgcctccagagagctca
tatttctctgcaaatgcattgcgtgctgttgccctttcttcagctgtatcaacgtcttta
cttgagctggctgtaaaggttgttgctgccaatatggtgagaacagaccggtccttgtct
ggaacacatcttctttgtgctgttggcaggcatcaagaagcttgttctcagttacaagat
gctggatgctggactgatgctgcaacattagctgcaacacatcttaaaggaactgattat
gcaagggtgttgctgaggtgggctcagcatgttcttcattctgaacacaacatttggagg
gcgctgatcttgtatgttgctgctggtgcactgccagaggcgttagcttctcttcgtggg
gcacaacaaccagacacagcagccatgtttatactggcttgccaggaaatccatagtgaa
tatctatctagcttggatgatgaattaagatcttcagataagttggttaacttgccggga
ctgaacccagaaagtgaagatgtccatgcagttggtgaatactatggacaataccagaga
aaactggtccatctttgcatggactcccaacctttctccgactga
DBGET
integrated database retrieval system
