Solanum pennellii: 107026228
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Entry
107026228 CDS
T04130
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107026228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107026228
03012 Translation factors [BR:
spen03012
]
107026228
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107026228
Translation factors [BR:
spen03012
]
Eukaryotic type
Release factors
107026228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
107026228
NCBI-ProteinID:
XP_015082612
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Position
7:1235033..1239111
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AA seq
437 aa
AA seq
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MADSHDNDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIITEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEVLANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKVLEMGAIETLIVWENLDINRYVLKNNTSGETIIKHLNKEQDTVQSNFRD
PDTNAELEVQDKLSLLEWFANEYRKFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDV
RAFDELSDDGEVYEDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagtcacgataatgataagaatatcgagatatggaagatcaagaaacttata
aaggcactcgaagctgctcgaggcaatggtaccagcatgatttctctaatcatgcctcca
cgggatcaagtatctagggtcactaagatgcttggcgatgagtttggaactgcgtcaaac
atcaaaagtagagtgaatcgtcaatctgtactgggtgcaatcacatctgctcagcagaga
cttaaactctacaataaggttccaccgaacgggcttgtgctttataccggaacaatcata
actgaagatgggaaagagaagaaggttacaattgattttgagcccttcaggcccattaac
gcttctctgtatctttgtgataacaagttccatacagaagccctgaatgaacttctggaa
tccgatgacaagttcgggtttattgtgatggatgggaatgggacactttttgggacattg
agtggcaataccagggaggtccttcacaagtttagtgttgatctgcccaaaaaacatgga
agaggaggtcagtctgcactgcgttttgctcgtcttcggatggagaaacgtcacaactat
gtgaggaaaacagccgagcttgcaacccaattttatattaatcctgctaccagccagccc
aatgtttcaggcttgatattagctggatcagctgactttaagacggagcttagccagtct
gatatgtttgatcctcgtcttcaggcaaagattttaaatgtggtcgatgtttcgtatgga
ggggagaacggtttcaatcaagcaattgagctatctgccgaggtcttggccaatgtgaaa
tttatacaagagaagaaattgataggtaagtattttgaggagatcagtcaggacaccggg
aagtatgtttttggggttgatgataccttgaaggttctggaaatgggtgctattgagacc
ctaattgtgtgggaaaatctagacattaataggtatgtgctgaaaaataacacctccgga
gaaacaatcatcaagcacttgaacaaggagcaagacactgtccaaagtaacttccgtgat
cctgatacaaatgctgaattagaagttcaggataaattgtcattacttgagtggtttgcg
aatgagtacaggaaatttggttgtagtttggagttcgttaccaataaatcacaggaagga
tctcagttttgccgtggttttggtggcattggaggaattctccgttaccagcttgatgtt
agagcttttgatgaactttctgatgatggtgaagtttacgaagattctgaatag
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