Solanum pennellii: 107026309
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Entry
107026309 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107026309
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107026309
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107026309
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107026309
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107026309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
DUF1955
Motif
Other DBs
NCBI-GeneID:
107026309
NCBI-ProteinID:
XP_015082702
UniProt:
A0ABM1HAF3
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All DBs
Position
7:complement(75409433..75421182)
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AA seq
686 aa
AA seq
DB search
MAYLQMNWQPNLLSHKRKTGPPLGLKNIGNTCYINSVLQCLTYTPPLAYFCLKSQHSASC
DSEAAAASGKKSECPFCILEKRIARSLSLESALDTPAKINSCLKIFAQHFRFGRQEDAHE
FLRYVIDACHNTCLRLKKLQQQTKKGGGGGVDGNGNTIVKEIFGGALQSQVKCLSCGAES
NKVDEIMDISLDVLHSSSLKDALQRFFQPEVLDGNNKYKCENCKKLVTARKQMSILQAPN
VLVIQLKRFEGIYGGKIDKPIAFEEVLVLSSYMCKASQDLHPEYNLFGTIVHSGFSPDSG
HYYAYIKDAVGRWYCCNDSQVSPKILQEVLSEKVYILFFSRTKQRSPSTKTCLSINGSKS
NHSNGLAKSKILTSDLAKTENEKQVLGHPSEKENVVMSKVSKVHSSPVRDLGIFEKSSFK
RPTSGNIKMVFHSKESGNRTGDVRASVLTEKKITSLSDKNGVSKSCGNGQGTRSHALTNG
NGNEKLPIVAISPVADGPHKDYGGSNGKAAGKDSYHKEVNRSSSLANGNGKIQSVATDTL
RESLPRNNVENSESLAAISSAYRDTSNGHVESSSISGSKRKSPDQCILLEYDVQSRAKVE
ELKKELHQEASSFLRTCGWSEEVYAFMRSKKSGAQSNFQASDVNAMKELLIADAKSMFIS
QIPQSLKGSLIERLTSFSQGTPPSST
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcctatttgcaaatgaattggcagcccaacctgcttagccacaaacgcaagactggt
cctcctttagggcttaaaaacatcggcaatacctgttatatcaactccgttcttcagtgc
cttacttatacccctcctcttgcttatttctgcctcaaatctcaacattccgcttcttgt
gattctgaagctgcagctgcttcagggaagaaaagtgaatgtcctttttgtatattagag
aagagaatagctaggtctttgagtcttgaatcagcactagatactccggccaagattaat
agttgcttaaagattttcgcccagcattttaggtttgggaggcaagaggatgctcatgaa
ttcttgcgatatgtcattgacgcctgtcacaatacgtgtttgcggttgaagaagttgcag
cagcagacaaagaagggtggtggaggtggtgtagatgggaatgggaataccattgttaag
gagatctttgggggtgctctgcagagccaggtcaagtgtttgtcatgtggtgctgaatca
aataaggtggatgagattatggatataagtcttgatgtattgcacagcagctcactcaaa
gatgctttgcagagattttttcagcctgaggttttggatggaaacaacaagtacaagtgt
gagaactgtaagaaattggtgacagcaaggaagcaaatgtcaattcttcaagcaccgaat
gttcttgtcattcagctcaagaggtttgaaggaatatatggtgggaagattgataagccc
attgcatttgaggaggttctagtgctttcaagctacatgtgcaaagcaagccaggatctg
catccagaatacaatctttttggaactattgtccactcaggcttttcaccagattcaggg
cactattatgcatatattaaggatgctgtgggtcgttggtactgctgtaatgattctcag
gtttctcctaaaatcttgcaagaagtgttgtcagaaaaggtgtacatccttttcttctct
cgtaccaaacagaggtcaccatccaccaagacatgtttatcaataaatgggtcaaaatcc
aatcactccaatggcttggctaaatccaaaatcttgaccagtgacttagcaaaaacagaa
aacgaaaagcaagttttaggccacccctccgagaaagaaaacgtagtgatgtctaaggtc
agtaaagtgcattcgagcccagtgcgagatttgggcatatttgaaaaatcttccttcaag
cgacctacctctggtaatatcaaaatggtttttcattcaaaagaatctggcaatagaact
ggtgatgtgagagcatcagttcttacagagaaaaagattacatcattatcagacaagaat
ggtgttagcaaaagttgtggtaatggccaagggacaagatcacatgccttaacaaatgga
aatggaaatgaaaaacttccaattgtagcaatcagtcctgtagcagatggtccccataaa
gattatggtggaagtaatggaaaggctgcaggaaaggattcataccataaagaggtgaat
agatcatcatctttagcaaatggaaatggtaaaatccaaagtgttgcaacggataccttg
agggaaagtctgcctagaaataatgtggagaatagtgaaagcctggcagcaatatcttct
gcatacagggatacatccaatggccatgttgaatcgtcttctatctcaggttcaaagaga
aaatcaccagatcagtgcatcctgcttgagtatgatgttcagtctcgtgcaaaggtggaa
gaattaaaaaaagagctccatcaggaagcttcatcatttctaagaacatgtggttggtca
gaagaagtttatgcttttatgcgttccaaaaagtcgggggcacaatcaaactttcaagca
tcagatgttaatgcgatgaaggagttgttgattgcagatgccaaatcaatgtttatctca
caaattcctcaatcattgaagggcagtcttattgaacgtttaacatcatttagtcaagga
acgccaccctccagcacctaa
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