Solanum pennellii: 107026450
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Entry
107026450 CDS
T04130
Name
(RefSeq) transcription initiation factor IIF subunit beta
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
spen
Solanum pennellii
Pathway
spen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107026450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107026450
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107026450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-GeneID:
107026450
NCBI-ProteinID:
XP_015082902
LinkDB
All DBs
Position
7:complement(42166108..42175299)
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AA seq
265 aa
AA seq
DB search
MEEDHGNSNSSITVDTTKWDRSVWLMKCPLVVSKSWQSQAAASSSSSDSPQVAKVIVSVD
PLRSDDSSALQFTMEMGGNDVGNMPKSYSLNMFQDFVPMCVLSETGQGRVTMEGKVEHKF
DMTPHTRNMEEYRKMCRERTNKSMIKNRQIQVIDNDRGVNMRPMPGMIGMIASSSKDKKK
AVPVKGPEVKRTRRDRGELEDIMFKLFERQPNWTLKQLVQETDQPAQFLKEILNELCVYN
KRGTNQGTYELKPEYKKSVEETGAE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatcatggaaacagcaacagtagtataacagtggatacaacaaaatgggac
agatcagtgtggttaatgaagtgtcctttagttgtctccaaatcatggcagtctcaagcc
gcagcttcatcttcctcctcagattccccccaagttgctaaagttattgtctctgttgat
cctcttcgttccgatgactcatctgctctgcaattcactatggagatgggtggaaatgac
gttgggaatatgccgaaaagttactccttgaacatgttccaagacttcgtcccaatgtgt
gtgctctcagagacaggtcaaggaagagttaccatggaaggaaaggttgaacataagttt
gatatgacacctcacactcgtaacatggaggagtaccggaaaatgtgtcgtgaaaggaca
aataagtcaatgatcaagaacagacaaatacaggtcattgacaatgatcgtggagtcaat
atgaggcccatgccggggatgattggcatgattgcatccagttctaaggataagaagaaa
gcagttcctgttaagggaccggaagtcaagagaactagaagggaccgtggcgaactggaa
gatatcatgttcaagctttttgaaagacaacctaattggactttgaagcagttagtacaa
gaaacagatcaacctgcgcaatttttgaaagagatactgaatgagctttgcgtgtacaat
aaaagaggaacaaaccaaggcacatatgaattgaagccagagtataagaaatcggtggag
gaaacaggtgctgaatga
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