Solanum pennellii: 107026540
Help
Entry
107026540 CDS
T04130
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107026540
Enzymes [BR:
spen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
107026540
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107026540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
107026540
NCBI-ProteinID:
XP_015083026
LinkDB
All DBs
Position
7:71531232..71540705
Genome browser
AA seq
646 aa
AA seq
DB search
MAGKLGKKVGSKLGKPPTKKKQKKEPLPPKPLEKEDLFSDSEGTDGDFEEDGGSGDEEQQ
EMNSDSDMSSDLDDPFAADILASGDADDGSDVHSDSDVDSDSDADDTDLVRKSKAIDDEK
KREEEEGDLELQLNIKEEADEFRLPTTEELEEETNRPPDLSNLQRRIKEIVRVLSNFKSL
RQEDVTRKDYVDQLKRDLGSYYGYNDFLIESLVELFPPVELIELIEAFEKPRPISLRTNT
LKTRRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSFLP
VMALAPQENERIVDMAAAPGGKTTYVAALMKNSGIIYANEMKESRLKSLTANLHRMGVTN
TIVCNYDGRELPKVLGQNTADRILLDAPCSGTGVISKDESVKTSKTAADIQNCSHLQKEL
ILAAIDMVDANSKSGGYIVYSTCSIMVDENEAVIDYALKKRDVKLVPCGLDFGRPGFVRF
RQHRFHTSLDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAAKASAQSEEIEDADTIENSDQ
QNAEEDDDKHSEQEGIAKESGKLNEKAVADKKRKRDYQKHSDKKGVGQNGGGTKNGRAEN
KPVAPKRREKKKPPPIEEIAKAREEKRNALREEKRKATLKKKPGNK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaactcggtaagaaagtgggttctaaattagggaaaccaccaaccaagaag
aagcagaagaaggaacctttgccacctaagccactggaaaaggaggatctttttagtgac
agtgaaggaactgatggagattttgaagaagatggaggttctggtgatgaagaacaacag
gaaatgaactcagattctgacatgtcttctgacttggatgaccccttcgctgctgatata
ttagcaagcggtgatgctgacgatggttccgatgttcattccgattcggatgtagattct
gattcagatgcagatgatactgatcttgtaaggaagtcaaaagctattgatgatgaaaag
aaaagagaggaggaggagggtgatttagaattgcagctcaatattaaagaagaagctgat
gagttcagattgccaacaactgaggagctcgaagaagaaacaaatagacccccggatctc
tctaatctccaaaggaggataaaagaaattgttcgggtgctctcaaatttcaagtcattg
aggcaagaagatgtgacacgtaaggattacgttgatcaacttaaaagggacttgggttca
tattatggatacaatgattttctcattgaatcgttagtggagctgtttccccctgttgag
ttgattgaacttattgaagcatttgaaaagccccggccaatttctctgcggacaaacact
ttaaagactcgcagacgggatttagctggtgttcttcttaacagaggtgtcaatttggat
ccactaagcaaatggtcaaaggttgggctagttgtatatgattctcaagttccagttggt
gccactcctgagtatatggctggtcactacatgctccaaagtgcgagttcgtttctgcct
gtaatggcccttgcccctcaagagaatgaacgtattgttgatatggctgctgctcctgga
ggcaaaacaacttatgttgctgcactgatgaaaaatagtggtattatttatgcaaatgag
atgaaggagtcgagacttaaatcactcactgctaacttacatcgcatgggggtaacaaac
accattgtctgtaactatgatggaagagagctacctaaagtcttgggtcagaacactgcc
gatagaattttgctggatgctccctgcagtggcactggggtgatttccaaggatgagtct
gttaaaacttccaaaactgctgcagatatacaaaattgctcacacctgcagaaggaactg
atacttgcagcaattgacatggtcgatgccaactcaaaatcgggtggatacatagtgtat
tctacctgctccatcatggttgatgagaatgaagcagttatagactatgcactcaagaag
agagatgttaaactcgtgccatgtggacttgattttggcaggcccggatttgttcgcttt
aggcagcaccgtttccacacatcgttggacaagacacggcgattctatcctcatgtgcac
aacatggatggattctttgtggcaaagttgaaaaagatgagcaattccaagtctgctgca
aaagcgtcagctcagtccgaagaaatagaagatgctgataccattgagaacagtgaccag
cagaatgctgaagaggatgatgacaagcattcagagcaagaaggcattgctaaagagagc
ggaaaattgaatgaaaaagcagtagctgataaaaaaaggaagagagattaccaaaagcat
tcagataaaaaaggtgttggacaaaacggtggtggaactaaaaatgggagggcagaaaac
aaaccggtggcaccaaaaaggagggaaaagaagaaaccccctcctatagaagaaatcgca
aaagccagggaagagaagaggaatgctcttagggaagaaaaacgaaaagccacattgaag
aaaaaacctggaaacaagtga
DBGET
integrated database retrieval system
