Solanum pennellii: 107026806
Help
Entry
107026806 CDS
T04130
Name
(RefSeq) high mobility group B protein 13-like
KO
K09273
upstream-binding transcription factor
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107026806
03021 Transcription machinery [BR:
spen03021
]
107026806
Transcription factors [BR:
spen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
107026806
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
107026806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
107026806
NCBI-ProteinID:
XP_015083382
LinkDB
All DBs
Position
8:69583681..69586798
Genome browser
AA seq
500 aa
AA seq
DB search
MASVAEMTLPSDVPAKKGKSRKVLKQKKQSLNEANILAGTVAQSPSMVLPVDDSVKENVD
PQSQKKSNKRGASKAAKQQTDQSSFEKELLEMQEKLQKMTLEKEQTEEMLKAREEMLKQK
EEELDARGKEHEKLQTELKKLQKMKEFKPTLNFPIVQSLRDKEEKKEKKKADPSKKRPVP
PYLLWSKDQWNEVKKANPNAEFKEMANLLGAKWKTISAEEKKPYEEKYQAEKEVYLKIVG
MEKREHEAMRLLDDEQKQKTAMELLEQYIQFQQEAIVNENKKKKKEKDPLKPKQPLSAFF
LFTNERRAALLAENNNNVKEVAKVTGEEWKNMTEQQKAPYEEMAMKNKEKYLQEMEVYKK
KKDEEAAEHMKEEEELMKLKKQEALQLLKKKEKTENLIKKTKENRQKKKQKDDNVDPNKP
KKPASSFFRFSREERKKLVEERPGINNSTINALISLKWKELSEEEKQVWNNEAAEAMEVY
KKEMEEYNKTAAAEKQKNNN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgttgctgaaatgacacttccctccgacgtcccggcgaagaaggggaagtct
aggaaggtgctgaagcagaaaaaacagtcgttgaacgaagccaatatactggctggaact
gtagctcagtccccttctatggtgttgcctgtggatgattctgttaaggagaatgttgat
ccacaatcgcagaagaaatcgaacaagagaggggcctcaaaggcggcgaagcagcagacg
gaccaaagttcttttgagaaagagctgcttgaaatgcaagaaaagcttcagaagatgaca
cttgagaaggagcagactgaggaaatgttgaaggctagagaggagatgctgaagcagaaa
gaggaagagctcgacgcgcgaggtaaagagcatgagaagcttcagactgaactcaaaaag
ctgcagaaaatgaaagagttcaaaccgacattgaacttccctattgtgcaatcgctgaga
gacaaagaggaaaagaaagagaagaaaaaggcagatccttcgaagaaaaggccggttccg
ccatatctattgtggagcaaagaccaatggaatgaggtgaaaaaggctaatccaaatgct
gagttcaaagagatggctaatttattgggtgctaagtggaaaacaataagtgctgaagag
aaaaagccttatgaggaaaaataccaagctgagaaagaagtatacttgaagatagtcgga
atggagaagcgcgaacatgaagcgatgagactcttggatgacgagcagaaacaaaagaca
gctatggagttacttgaacaatatattcagtttcagcaagaagcaatagtgaatgaaaac
aagaagaaaaagaaagagaaggaccctttgaaaccaaaacagcctttatcagcatttttc
ctgttcacaaacgagcgtcgagctgctctacttgctgagaacaacaacaatgtgaaggag
gtggcaaaggttactggtgaagagtggaagaacatgacagagcaacaaaaagcaccttat
gaggagatggcaatgaagaacaaggagaaatatttgcaagaaatggaagtttataagaag
aagaaagacgaagaagctgctgaacacatgaaagaagaggaagaattgatgaaactcaag
aagcaagaagcacttcaattgctcaaaaagaaagaaaagacagaaaatttgatcaagaaa
acgaaagaaaatcgccaaaagaagaaacaaaaggatgacaatgtggatcctaacaaacca
aagaagcctgcttcatcattcttccgtttcagtagagaggaaagaaagaaactagtcgaa
gagcgtcctgggattaacaattctaccattaatgctctcatttcactgaaatggaaggaa
ttgagtgaagaagagaaacaagtgtggaataacgaagcagctgaagcgatggaagtctac
aaaaaggaaatggaagaatacaacaaaactgcagctgctgaaaagcagaagaacaacaat
tag
DBGET
integrated database retrieval system
