Solanum pennellii: 107026847
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Entry
107026847 CDS
T04130
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107026847
Enzymes [BR:
spen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
107026847
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
107026847
Prokaryotic type
107026847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
NNH2
FadA
Motif
Other DBs
NCBI-GeneID:
107026847
NCBI-ProteinID:
XP_015083425
LinkDB
All DBs
Position
8:complement(67566110..67569605)
Genome browser
AA seq
488 aa
AA seq
DB search
MASAIPVVQSGRIRVVKQGSGPLVGPVVYWMFRDQRIRDNWALIHAVDQADKANVPVAIA
FNLFDQFLGAKARQLGFMLRGLEKLQGNLESTLRIPFFLFQGEAIDTIPNFLKECGASLL
VTDFSPLRDVRSWKEKICERVDESVTIHEVDAHNIVPLWVASNKLEYSARTIRGKINKLL
PEYLIELPPIEPPKIKWSSSNPPIDWPKLVSDVVRKGAEVPELEWCEPGEDAAFEVLMGS
KKGFLTTRLKTYSTDRNNPLKPQALSGLSPYLHFGQISAQRCALEANKVRKNYTQAVDTF
LEEMIVRRELSDNFCYYQPQYDSLLGAWEWARKTLMEHASDKREHIYTLEQLEKAQTADV
LWNASQLEMVHYGKMHGFMRMYWAKKILEWTNGPEEALAITIYLNDKYHIDGRDPSGYVG
CMWSICGVHDQGWRERPVFGKIRYMNYAGCKRKFNVDGYISYVKRLVGESKKRKAQVILD
KKAKELRN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcaattccagttgttcagtcgggtcggatccgggttgtgaagcaaggatca
ggaccgttggttggtccggtggtgtattggatgtttagagatcaacggataagagataac
tgggcgttgatccacgccgttgatcaagctgacaaggcaaatgtacctgtagctattgct
ttcaatttgttcgatcagtttttaggtgctaaagctagacagctagggtttatgcttaga
ggccttgagaagcttcaggggaacctcgaaagtactcttcgaattccgttttttctattt
cagggagaagcaatagacacaattcccaactttcttaaagaatgtggagcttctcttcta
gtaacggatttctcaccgttgagggatgttaggagttggaaagaaaaaatttgtgagagg
gtggatgaatcagtgacaatacatgaggttgatgcacacaacattgttcctctttgggtg
gcatcaaataaattggaatacagtgctagaacgatacgtggtaaaataaataagctgctt
cctgagtatctgattgaattgcctccaatagagcctcctaagataaagtggtcttcttca
aaccctccaatagattggccaaaactagtttcagatgttgtaaggaaaggagcagaagta
cctgaacttgaatggtgtgaaccaggtgaagacgctgcattcgaagtgttaatgggaagt
aaaaaagggttcctgactaccaggttgaagacttattcaacggaccggaacaaccctctg
aaaccccaagcactttctggtctctctccttatttgcactttgggcagatatctgcacag
agatgtgcattagaagcaaacaaagttcggaaaaattatactcaggcagttgacacattt
ctggaggaaatgattgtgcgcagagagctttctgataacttctgctattatcagcctcaa
tatgattcattactgggtgcatgggaatgggcgcgtaaaaccttaatggaacatgcatct
gataaacgagaacatatatacacgctagagcaattggagaaggcacagactgcagatgtt
ctttggaatgcttcccaattagagatggttcattatggaaaaatgcatggttttatgagg
atgtattgggctaaaaagatactcgagtggacaaatggaccagaagaagctctggccatc
acaatatatttaaatgataagtatcatatagatggaagagaccctagtggttatgttgga
tgcatgtggtcaatatgtggcgtacacgaccagggttggcgagaacgcccggtatttggg
aaaatcagatacatgaactatgcaggttgcaagaggaagttcaatgtagacggatatatt
tcatacgttaagaggctagtaggtgaaagcaagaaaagaaaagcacaagtaattttggac
aaaaaggcaaaagaattgcgtaattag
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