Solanum pennellii: 107027021
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Entry
107027021 CDS
T04130
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
spen
Solanum pennellii
Pathway
spen02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107027021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spen02000
]
107027021
Transporters [BR:
spen02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
107027021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_25
AAA_16
AAA_29
ABC2_membrane_3
AAA_28
RecA
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
107027021
NCBI-ProteinID:
XP_015083661
UniProt:
A0ABM1HCU7
LinkDB
All DBs
Position
8:60823492..60830131
Genome browser
AA seq
1454 aa
AA seq
DB search
MEGGENLVRVSSARLSGSNVWRNSAMDVFSRSSSREDYDDEEALRWAALEKLPTYSRIRR
GLLLEEEGQSREVDIKKLDLIERRNLLDRLVKIADEDNEKLLMKLKQRIDRVGLDLPTIE
VRFEHLNIEAEARVGSRALPTIFNFTVNILEDFLNYLHILPSRKKPLPILHGVSGIIKPG
RMTLLLGPPSSGKTTLLLGLAGKLDKDLKVSGRVTYNGHGMDEFVPQRTSAYISQNDLHI
GEMTVRETLAFSARCQGVGDKYEILAELSRREKEANIKPDPDVDIFMKSAWNEGQEANVI
TDYTLKILGLEICADTLVGDEMIRGISGGQRKRLTTGEMMVGPARALFMDEISTGLDSST
TYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILLSDGEIVYQGPRENVLEFFEY
MGFKCPERKGVADFLQEVTSRKDQEQYWSRRHEPYRFITSCEFSDVFQSFHVGRKLGEEL
AVPFDKSKSHPAALTTKRYGISKKELLKACTAREYLLMKRNSFVYIFKMVQLTMMASIAM
TLFLRTEMHRDTTIDGAVYLGALFYAVITVMFNGFSELALSIMKLPSFYKQRDLLFFPAW
AYALPTWILKIPITLVEIAIWVCMTYYVIGFEADVGRFFKQLFLLICLNQMASGLFRFLA
ALGRNIIVANTFGSCALLVVLVMGGFILSRDDVKQWLIWGYWISPMMYAQNAIAVNEFLG
KSWSHVPPNSTGTDTLGVSFLKSRGIFPEARWYWIGAGALIGYVLLFNFLFTVALAYLNP
FGKPQAIISEEIVAEKNASKRGEVIELSPIGKSSSERGNDVPISASSRSLSSRVGNITEG
DLSKRRGMILPFEPLSITFDDIRYAVDMPQEMKAQGFIEDQLELLKGVSGAFRPGVLTAL
MGVSGAGKTTLMDVLAGRKTGGYINGTISISGYPKQQETFARISGYCEQTDIHSPHVTVY
ESLQYSAWLRLPREVDTETRKSFIEEVMELVELIPLREALVGLPGVNGLSTEQRKRLTVA
VELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELL
LLKRGGEEIFVGPLGRHSSHLIKYFEGIDGVLKIRDGYNPATWMLEVTSLAQEAVLGIDF
TELYKNSELYRRNKALIQELSVAAPGSKDLYFETKYSQSFFTQCMACLWKQHLSYWRNPP
YTAVRLMFTFFVSLMLGTIFWGLGSKRGRQQDILNAIGSMYSAILFLGVINATSVQPVVA
IERTVFYRERAAGMYSALPYAFGQVMIELPHLFLQTIIYGVIVYAMIGFEWTVTKFFWYL
FFMYFTLLYFTLYGMMTVAVTPNHTIASIVSSAFYTIWNLFCGFVVPKTRMPVWWRWYYY
ICPLSWTLYGLIASQFGDVQDRLDTKETVEQFLENFFDYKHDFVGYVAVILVGISVAFLF
IFAYSIKSFNFQKR
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggtgaaaatcttgtgagggtgagtagtgcacgtttgagtggttcaaatgta
tggagaaatagtgctatggatgtgttttcaaggtcttcttcaagagaagattacgatgat
gaagaggcgttgagatgggctgctcttgaaaaacttccaacttatagtcgtataaggaga
ggccttctcttagaagaagaaggacaatctagagaagtcgatataaaaaagcttgatttg
atcgaaaggaggaatcttttagataggctggtcaagattgctgatgaagataatgagaag
ttgttgatgaagctcaaacagcgcattgatagagttggtctggatcttcctacaattgaa
gtccggtttgagcatttgaatatagaagcagaagctcgtgtaggtagtagagctttacca
acaatattcaactttacagttaacatcttagaggatttcttgaattatctacatatcctt
ccaagtagaaagaaaccattgccaatccttcatggggtcagtggaatcatcaagccagga
agaatgacactgcttttaggaccaccaagttcgggaaaaacaacgttgctgttaggtttg
gctgggaaacttgataaagatctcaaagtttcaggtagagttacatataatgggcatggg
atggatgagtttgtgccacaaagaacatctgcttatataagccaaaatgatcttcatatt
ggagaaatgacagtcagggaaacactggcattttccgctagatgtcaaggagttggagac
aaatatgaaattttagcagagttgtctaggagagaaaaggaagcaaatattaagccagat
cctgatgttgatatcttcatgaagtcagcgtggaatgaaggacaagaggctaatgttata
acagattatactctcaagatattgggacttgaaatttgtgctgataccctcgttggagac
gaaatgattcgaggaatttctggggggcaaagaaagaggctaacaacaggggagatgatg
gttggaccagcaagagcactttttatggatgagatatcgactggtttagacagttcaacg
acttatcagattgtcaattcaattaggcagtcaatccacattcttcaaggaactgctgta
atatcacttctgcagcctgcaccagaaacttatgacttgtttgatgatattattcttcta
tcagatggggaaattgtgtaccaaggtccccgggaaaatgtactcgagttcttcgagtac
atgggcttcaaatgccccgagaggaaaggagttgctgatttcttacaagaagtgacatca
agaaaggatcaagagcaatactggtcacgtcgtcatgaaccttataggtttatcacatct
tgcgaattttctgatgtatttcaatcgtttcatgttggacggaagcttggtgaagagctt
gctgttccctttgacaaatccaagagccaccctgctgctctaaccaccaagaggtatggt
attagcaagaaagaactcttgaaagcctgcacagctagagaataccttcttatgaagagg
aattcatttgtctacatattcaagatggtacagctaacaatgatggcgtctatagcaatg
acactcttcctacgaacggagatgcacagagatacaacaatagatggtgcagtatactta
ggtgcactgttctacgcagttatcacggttatgttcaatggtttctcagagcttgccctc
agtattatgaagcttccttccttttacaaacaacgcgatcttcttttctttcctgcttgg
gcatatgctctgcctacttggatcctcaagattccgatcacacttgtagaaattgctatt
tgggtgtgtatgacttattatgttattggattcgaggcagacgttgggaggttcttcaaa
cagctatttctgctcatatgtcttaaccagatggcctcagggctgtttcggttcttagct
gctcttggaaggaatatcattgttgcaaatacatttggatcatgtgcactgctcgtagtt
cttgtaatgggtggattcattctgtcaagagatgatgtgaaacaatggttgatatggggt
tactggatttcccctatgatgtatgcgcagaatgctatagctgtgaacgaatttctaggg
aagagttggtcacatgttcctccgaactccacgggcacagatacattaggagtatcattc
ttgaaatcgcgtggaatctttccagaagcaagatggtattggattggagcaggagctctt
attggatatgttctgctcttcaatttcttgttcacagtggccttagcttatctcaaccca
tttggtaaacctcaggcaattatttctgaagagattgtggccgagaagaatgcaagcaaa
aggggtgaggttattgaactatctcccataggaaagagttcttcagaaagaggaaatgat
gttccgataagtgcatcttccaggtctctgtcctcaagagtaggcaacataactgagggt
gatttaagcaagagaaggggaatgattcttccttttgaacccctttcaattacttttgat
gatatcagatatgcagtagatatgccacaggaaatgaaagctcaaggttttatcgaggac
caacttgaactcttgaaaggggtaagtggtgcttttagaccaggagttttgacagctcta
atgggtgttagtggagctggtaagaccacacttatggatgtcttagctggtaggaaaacc
ggtggatacattaatgggaccatcagtatatcaggatacccaaagcagcaggaaacgttt
gctcggatatcaggatactgtgagcaaactgacattcattcacctcatgttacagtatac
gaatcattgcagtattctgcttggcttcgactgcctcgtgaagttgacaccgaaacccga
aagagtttcattgaggaggtcatggaacttgtagagctaatccctctaagagaagcactt
gttggattgcctggagtaaatggtctttcaactgaacaacgaaaacgacttacagttgca
gttgaacttgttgccaatccttctataatattcatggatgagccaacctctggattagat
gcaagagcagctgcaatagtgatgagaacagtcagaaacactgtagatacaggtcgaaca
gtagtatgcaccatccatcagcctagcattgacatatttgatgcttttgatgagctccta
ctcctgaaacgaggaggcgaagaaatatttgtcggcccattaggacgccattcttctcac
cttattaagtattttgagggaatcgatggagttctgaaaatcagagatggttacaatcca
gcaacatggatgttggaggtaacttcactagcacaagaagcagttcttggaattgacttt
acagaattgtataagaactcagaattgtataggagaaacaaagcgttaatccaggaacta
agtgtggcagccccaggttcaaaagacctatactttgaaaccaagtattctcagtctttc
ttcacccaatgcatggcttgcttatggaaacaacacttgtcatactggcgaaatcctcct
tacacagcagtcaggctcatgttcacattctttgtttctctcatgcttggaacgatattc
tggggtcttggttccaaaaggggaaggcaacaagatattttgaatgcaattggttcaatg
tattctgctatcttatttcttggcgtaataaatgctacttctgtacagccagtcgttgcc
attgagaggacagtcttctatagggaaagagcagctggaatgtattcagctctgccttat
gcatttggacaggttatgattgaactcccacaccttttcctccagacgatcatatatggt
gttatagtctatgcgatgatcggatttgaatggacagttaccaagttcttttggtatctc
ttcttcatgtacttcaccttgttatacttcacattatacgggatgatgacagtagctgtt
actcctaatcacaccattgcatccatcgtttcatctgcattttacacaatatggaacctt
ttctgtggattcgtcgttccaaaaacaaggatgccagtgtggtggagatggtactattac
atttgccccctttcgtggacattatacggactaattgcatcacaatttggagatgtacaa
gacagattggatacaaaggaaacagtggaacaattcttagagaattttttcgattacaaa
cacgattttgtgggatacgttgcagtcattctagttggaatatcagttgcttttctcttc
atttttgcttactcaatcaaatcattcaacttccagaaaagatag
DBGET
integrated database retrieval system
