Solanum pennellii: 107027057
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Entry
107027057 CDS
T04130
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spen03012
]
107027057
Translation factors [BR:
spen03012
]
Eukaryotic type
Initiation factors
eIF-3
107027057
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
ZW10_C2
DUF1722
Curto_V2
Motif
Other DBs
NCBI-GeneID:
107027057
NCBI-ProteinID:
XP_015083710
UniProt:
A0ABM1VD32
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All DBs
Position
1:complement(101854815..101874516)
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AA seq
918 aa
AA seq
DB search
MASRFWTQGDSDTEEEEESDYELEDDAPAENPDAPSGPGSRYLAADDSDSDESDGQKRVV
RSAKDKRFEELSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRITESIKPPNLYIKA
LVMLEDFLNQALANKETRKKMSSSNAKALNSMKQKLKKNNKQYEELINKYRENPPVSEEE
GGDDEESEEEEEEDEEEFEEDPTKIASASASDDDDPDTIGDGWEKKVNKKDKLLDKQFKD
PSQITWEIVNKKFKEIVAARGRKGTGKMELVEQLTFLTKVAKTPAQKLEILFGVVSAQFD
INPGLSGHMPINVWKRCVQNMLTILDVLTQYPNIVVDDMVEPDENETQKGADHSGTIRIW
GNLVAFVERIDVEFFKSLQVIDPHTSQYVERLRDEPLFLVLAQNVQRYLEQMGDYKGAAK
VALKQVEFIYYKPQGVYDAMRKLAELTEGGEAESVDENKVVEESKGPTAFIATPELVPRK
PAFEENSRTLMDSLVSLIYKYGDERTKARAMLCDIYHHAILDEFSTSRDLLLMSHLQENI
QHMDISTQILFNRAMAQLGLCAFRMSFVAEAHGCLAELYSAGRVKELLAQGVSQSRYHEK
TPEQERMERRRQMPYHMHINLELLEAVHLTCAMLLEVPNMAANSHDMKRRVISKTFRRLL
EISERQTFTGPPENVRDHVMAATRSLRQGDFQKAFDVINSLDVWRLLRNKDSVLEMLRGK
IKEEALRTYLFTYSASYNSLSLDQVAGMFDLSVSQIHSIVSKMMISEELHASWDQPSRCM
VFHDVEHTRLQALAFQLTEKLSVLAESNERATESRIGGGALEGLPPRRRDGQDYAAAAGG
GGRWQDFSFSQGRQGSSGGRTGYAGGRSTSGQTSRDRTNQARGTLGGQGSRYQSGTISRG
SQMDGSGRMVNLNRGGRS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgtttttggactcagggtgatagtgataccgaagaggaggaggagagtgat
tacgagctggaagatgatgcgccagctgaaaatccagatgcaccgtctgggcctgggtca
agatatcttgcagctgatgatagcgatagtgatgaatcggatggacagaagcgagttgtc
cggtcagccaaggacaagcgttttgaggagttgtcagctacagttgatcagatgaagaat
gctatgaagattaatgactgggttagcttgcaggagagctttgacaagattaataagcag
ctggagaaggtcatgcgcattacagaatctattaaaccaccaaatctctatatcaaagct
ctagtgatgctggaggatttcttgaatcaggccttggccaataaggagactaggaagaag
atgagtagtagtaatgctaaagccttgaattcaatgaaacagaaactgaaaaagaataat
aagcagtacgaggagttgattaataagtatagggaaaatcctcctgtgagcgaggaggag
ggtggtgatgatgaagagtcggaagaggaagaagaagaggacgaagaggagtttgaggag
gacccaacaaagattgcatctgcatctgcatctgatgatgatgatccggacacgataggt
gatgggtgggagaagaaggtgaacaagaaagacaaacttctggataaacagtttaaagat
ccgagtcaaatcacgtgggagatagtcaacaagaagttcaaggaaatcgttgctgctagg
ggtagaaaggggactggaaagatggaattggtcgaacagctcaccttcttgaccaaggtg
gccaagactccagcacagaagcttgaaattctgtttggtgttgtgtctgcccagtttgat
atcaatccaggtctcagtggacacatgcctataaatgtgtggaaaaggtgtgtgcaaaat
atgcttacaatccttgatgttttgacccaatacccaaacattgtggttgatgatatggtg
gagcctgatgagaatgagacccagaaaggagcagaccactcagggactataaggatctgg
ggaaatttggttgcctttgttgaaaggattgatgtagagtttttcaagagcttgcaggta
attgatccacataccagccagtatgttgagaggctgagagatgagccattgtttttggtt
cttgctcaaaatgtccagcgttatttagaacagatgggcgactataagggcgctgccaaa
gtggctcttaaacaggttgaattcatctattataagccgcaaggagtgtatgatgctatg
aggaagttggctgagctcacagaaggtggagaggcagagtctgtagatgaaaacaaagtg
gttgaggagagtaaaggtccaactgcatttattgcaactcctgagcttgtgcctaggaaa
cctgcttttgaagagaacagcaggacattgatggacagtctcgtttctctcatatataaa
tatggagatgaacgaaccaaggcccgtgcaatgctctgtgatatatatcaccatgctatc
ttggatgagttttcaacatcccgtgacttgttattgatgagtcacttgcaggaaaatatc
cagcacatggacatttcaactcagatactttttaacagagccatggctcaacttgggctc
tgtgcgttcaggatgtcatttgttgcagaagcgcatggttgccttgctgaactctattct
gctggcagggtgaaagagttactggcgcaaggtgtctcccaaagccgatatcatgagaag
actccagaacaggagcggatggagaggaggcgtcagatgccctaccatatgcatataaat
cttgagcttcttgaggctgtccatctgacatgtgcaatgcttcttgaagtgccaaacatg
gcagctaatagccatgacatgaagcgcagggtcataagcaaaacattccggagattgctt
gaaatcagtgagaggcaaactttcactggtccacctgaaaatgtgagggaccatgtcatg
gcagcgacaaggtccctgaggcaaggagactttcagaaggcttttgatgtcatcaactcc
cttgatgtgtggaggctgcttcgcaacaaggacagtgttctggagatgcttagaggcaaa
atcaaggaagaggcactgaggacctaccttttcacatattctgcttcttataattctctg
agtttggatcaggttgctgggatgtttgacctttcagtttctcagatccatagcattgtg
agcaaaatgatgatttctgaggagcttcatgcaagctgggatcaaccatcccgatgcatg
gtctttcatgatgttgagcatacaagattgcaggctttggcattccagttgacagaaaag
ctgtcagttttagcagaaagtaatgaaagagcaacagaatcgaggattggtggtggtgca
ttggagggccttccaccaaggcgcagggatggccaggattatgctgctgcagctggtggt
ggtggtagatggcaggacttctccttctcacaaggcaggcaaggtagtagtggtggccga
acagggtatgccggtggtagatcaacttctggtcaaacgtcgagggaccgtactaatcag
gcacgagggactcttgggggtcaaggctcaagatatcagagtggtacaatttccagggga
agccagatggatggatcaggtcgcatggttaatcttaacagagggggtcgttcttag
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