Solanum pennellii: 107027240
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Entry
107027240 CDS
T04130
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107027240
Membrane trafficking [BR:
spen04131
]
Autophagy
Other autophagy associated proteins
Others
107027240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_Vps41
Beta-prop_IFT140_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
107027240
NCBI-ProteinID:
XP_015083907
LinkDB
All DBs
Position
8:884863..890612
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AA seq
419 aa
AA seq
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MATVSPLPPPVQHPNTSPSPMLQAFLEQLDEQHKQQLQTQEAAVVQKDNDPKQSHLNPCP
THGFIDRSISTLYRVSFNQNGSCFAIGTDCGISVYSCDPYCEMFRRYFDNGGGIGIVEML
FRSNILVFVGNGDNPQYHRNKVIIWDDHQNRCIGELRFRSAVRGVRLRRDCIVVILEQKI
FIYNFADLKLVHQIETMSNPKGLCEISQTAVSPVLVCPGLQNGQVRVDHFTSKRTKFIFA
HDSRIASFALSHEGNVLATASTKGTLIRIFSAQDGTLLQEVRRGADRAEIHSVSFDPTAQ
WLAVSSDKGTVHVFRLKVNLGNQDKTRTTPNFRGTLAAASSPLSFIKGVLPKYFSSEWSV
AQFRLPGDSEFIVTFGHEKNTLLILGLDGSFIRCKFDPSSGKEMTQMEIHNFLKSEKAS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtttcccctctccccccaccagttcagcacccaaatactagtccgtcacca
atgcttcaagctttcttagagcaactagatgaacaacacaaacaacagcttcagacacaa
gaagctgctgttgtacagaaagataatgatcctaagcagagtcaccttaatccatgccct
acccatggcttcatcgatagatcaatttcaactctataccgtgtttccttcaatcaaaat
ggtagttgttttgccattggcactgattgcggcattagtgtctatagttgtgatccttac
tgtgagatgtttcgacgatactttgataatggaggtggtattggaattgttgagatgctc
ttcagaagcaatatactagtctttgtaggaaatggagataatccacaatatcatcgaaac
aaggtcataatttgggatgaccatcagaaccgctgcatcggagagctccgtttcaggtcg
gctgtgcgtggtgtgcggctccgacgggactgcattgtagttatacttgagcagaagata
tttatatataattttgctgatctgaagctcgtccaccagattgagacaatgtcaaaccca
aaaggactctgtgaaatttcacaaacggctgtatcacctgtgctggtgtgccctgggttg
caaaatggtcaagttcgggttgatcatttcacatcaaaaaggactaagtttatctttgca
catgattctaggattgcatcttttgctcttagtcatgaggggaatgtgctagcaacagca
agtaccaagggtactcttatccggattttcagcgcgcaggatggtacattgttacaggag
gtaaggagaggtgctgatagagcagaaattcacagtgtttcattcgatccaactgctcag
tggctagcagtctctagtgacaaaggcacagttcatgtttttaggctcaaggtcaatcta
gggaatcaggataagacaagaactactcctaatttccgtggtactttggctgcagcgagt
tcaccactatccttcatcaaaggagtacttccaaagtattttagctcagaatggtctgtg
gctcaattcagattacccggagattctgagttcattgttacttttggtcatgaaaagaat
acattgttaattcttggcttggatggaagctttattagatgtaagtttgatccgtcctct
ggcaaagagatgactcagatggagattcacaactttctgaagtccgaaaaggcctcgtga
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