Solanum pennellii: 107027345
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Entry
107027345 CDS
T04130
Name
(RefSeq) long chain acyl-CoA synthetase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spen
Solanum pennellii
Pathway
spen00061
Fatty acid biosynthesis
spen00071
Fatty acid degradation
spen01100
Metabolic pathways
spen01212
Fatty acid metabolism
spen04146
Peroxisome
Module
spen_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107027345
00071 Fatty acid degradation
107027345
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107027345
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spen01004
]
107027345
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107027345
Enzymes [BR:
spen01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107027345
Lipid biosynthesis proteins [BR:
spen01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107027345
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of breast milk
107027345
Exosomal proteins of breast cancer cells
107027345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
EIAV_GP90
Trypsin_2
P-mevalo_kinase
Motif
Other DBs
NCBI-GeneID:
107027345
NCBI-ProteinID:
XP_015084008
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All DBs
Position
8:complement(2981455..2994547)
Genome browser
AA seq
657 aa
AA seq
DB search
MAEQFIIEVEPAKPAKDGKPSVGPVYRSKFAKDGFPPPIEGLNSCWDIFRLSVEKYPNNR
MLGHRKIVDGKPGKYVWKTYKEVYDIVIKVGNSIRNCGVEKGGKCGIFGANCAEWIISME
ACNAHGLYCVPLYDTLGAGAVEFIISHAEVAIAFVEEKKVPELLKTFPNAAKYLKTVVSF
GEVTPQQKEEIEKFGVSLYSWDEFLQVGSKNQYDLPLKEKTDICTIMYTSGTTGEPKGVM
ISNNSIVTLIAGVKRFLESVNEALTMSDVYLSYLPLAHIFDRAIEECFIRHGASIGFWRG
DVKLLTEDLGELKPTVFCAVPRVLDRIYSGLQQKISSGGRLRSTLFNIAYARKLQYLKDG
CKYHEASPISDKVVFSKVRDGLGGKVRLILSGAAPLSSHVEAFLRVVACAHVLQGYGLTE
TCAGTFVSLPNQFDMLGTVGPPVPNVDVCLVSVPEMEYDALSSTPRGEICVRGDTLFSGY
YKREDLTKEVLIDGWFHTGDIGEWQPNGSLKIIDRMKNIFKLSQGEYVAVENLENVFGNN
PVIESVWVYGSSFESFLVAVVNPSKQQVEKWAKQNGLSGDFNSLCENSKVKEHILGELTK
VGKEKKLKGFEFIKALHLDPVPFDMERDLLTPTFKKKRPQLLKYYKDVIDTMYKDAK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaattcatcatcgaagtggagccggcgaagccagcgaaagatggaaaaccg
tcagtcggaccggtttatcggagtaaattcgcgaaagacggttttccaccgccgattgaa
ggcttaaacagctgttgggatattttccgtttgtcagtagagaaatatccaaacaaccga
atgcttggccaccgtaagattgtggatgggaagcctgggaagtatgtgtggaagacttac
aaagaagtgtatgacattgtcataaaagtagggaattccatccgaaattgtggtgtagaa
aaaggagggaaatgtggtattttcggtgccaattgtgctgagtggattatcagcatggag
gcatgcaatgctcatggactttactgtgtccctctgtacgacaccttgggtgctggtgca
gtggaatttatcatttcccatgcagaagttgcaattgcttttgttgaggagaaaaaagtt
cccgagcttttgaaaacatttccaaatgctgcgaagtacttgaagacggttgtgagtttt
ggggaagtgactcctcaacaaaaggaggagattgaaaagtttggagtgtctctttattcc
tgggatgagtttctgcaagtaggaagcaaaaatcagtatgatcttccactgaaggagaag
actgatatctgtacaataatgtataccagtggaacaaccggagaacccaagggtgtgatg
atctcaaataatagcattgttactcttatagctggagtgaagcggtttcttgagagtgta
aatgaggcgctgacaatgagtgatgtatatctctcatatcttcccttggcacatatcttt
gatcgggcgattgaagaatgtttcattagacatggcgcctcaataggattttggcgaggg
gatgtcaaattactaactgaagaccttggagagctgaaaccaactgtcttctgtgcggta
cctcgggtattagacagaatatattcaggtttgcaacagaaaatttcttcagggggtcgg
ctacgaagcacgttgttcaatattgcatatgctcgaaaacttcaatatttgaaggatggg
tgtaaatatcacgaagcatctccaatatctgacaaagttgttttcagtaaggtaagagat
gggctaggaggaaaagtacgtcttatattatctggagcagcacctctctcttctcatgta
gaagcttttctgcgagttgtagcatgtgctcatgttcttcagggatatggtcttactgaa
acatgtgctggtacatttgtatcactacccaaccagtttgatatgcttggtacggttggt
cctccggtgcccaatgtggatgtgtgcttggtgtccgttcctgaaatggaatatgatgct
ctttcaagcacaccacgtggagaaatatgtgtgaggggagacactctgttttctggttat
tacaagcgtgaggatctgacaaaagaagtcttgattgatggatggttccatacaggggat
attggtgagtggcaaccaaatggtagcttgaagataattgatcgcatgaagaatattttc
aagctatcacaaggagaatatgttgcagtcgaaaatttggagaatgtatttggcaataat
cctgttattgaatcggtatgggtatatgggagcagctttgagtctttccttgttgctgtt
gttaatccaagtaaacaacaagttgaaaaatgggccaaacagaatggcctctcaggggat
tttaattccctctgtgaaaattcaaaggtgaaagagcacatattaggggagctcactaaa
gttggaaaagaaaagaagctgaagggatttgagttcataaaagctctacaccttgatcca
gtaccatttgacatggaacgtgacctcctgactccaacatttaagaagaaaagaccacaa
ttgcttaaatactacaaggacgtgattgacaccatgtacaaggatgctaaatga
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