Solanum pennellii: 107027831
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Entry
107027831 CDS
T04130
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107027831
03036 Chromosome and associated proteins [BR:
spen03036
]
107027831
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107027831
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107027831
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107027831
microRNA pathway
RISC loading complex
107027831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF7780
Motif
Other DBs
NCBI-GeneID:
107027831
NCBI-ProteinID:
XP_027768416
LinkDB
All DBs
Position
1:98089548..98094523
Genome browser
AA seq
881 aa
AA seq
DB search
MASSKDEGTATKLDRHPMARQGTGSKGQKIRLLTNHFKVGMNNTDGHFFHYSVAINYEDG
NPVEVKGVGRKILDKVHQTYSMELAGKDFAYDGEKSLFTIGALPGNKLEFDVVLEDVSSS
RTDRGSPDGSPSDVDRKRSKKQPWSKAYKVVIKYAAKIPMQAIANALRGQDSEQYQEAVR
VLDIILRQHAAKRGCLIVRQSFFHNEPRNFVDLGGGVSGCRGFHASFRATQGGLSLNMDV
STTMIVKPGAVIDFLLANQNAKEPYQIDWSKAKRMLKSLRIKTSPSNREYKITGVSDKPC
NEQTFTLKQKNGDEGVQEVETTVYDYFTYHRRIPLQYSGDLPCINVGKQKHPTYIPLELC
TLVSLQRYTKALSNLQRASLVEKSRQKPQERMRALTDALKTSNYKADPLLGSAGISISDQ
FTQVDGRILPTPKLRVGDDQDLFPRNGRWNFNQKRLVEPVKLERWAAVNFSARCDVRKLC
MDLQRCGKMKGIFISPPFQHIFEENQQYRRNPAPVRVEKMLEELKSKLPAPPQFLLCILP
ERKNSDLYGPWKKRNLADLGIVTQCIAPTKINDQYLTNVLLKINAKLGGMNSFLTTELSP
TLPQISKVPTIIIGMDVSHGSPGRADAPSIAAVVSSRQWPFISRYRAAVCTQSPKLEMID
SLYKKVSDTVDEGLFRELLRDFYVSSKNVKPEHIIIFRDGVSESQFNQVINIELNQIIEA
CNHLEESWSPKFTVIVAQKNHHTRFFQTNSPDNVPPGTVIDNAVCHPKTNDFYMCAHAGP
IGTTRPTHYHILHDEIGFSADDMQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVAQF
IKFDEISEATSSHGGVSTAGTVLVPQLPRLHKNVRSSMFFC
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcaaaagatgaaggtacagcaacaaaattagaccgtcatcctatggctcga
caaggaactgggtccaagggacagaagattcgcctactcaccaaccatttcaaagtaggg
atgaacaacactgatgggcacttcttccactatagcgttgctataaattatgaagatgga
aaccccgtagaggtgaaaggagttggaagaaaaatccttgacaaggtccaccaaacatat
tcaatggagctagctggcaaagactttgcttatgatggggagaagagcttgttcactatt
ggtgcactgcctgggaacaagttagagtttgatgttgtcctggaggacgtctcatcatct
agaactgatcgaggcagccccgatgggagcccaagtgatgttgataggaaaagatcaaag
aagcagccatggtcaaaggcatacaaagtggtaattaagtatgctgcaaaaataccaatg
caagccattgcaaatgcactccggggacaagattctgagcagtatcaagaggcagtgaga
gtgcttgatataattctgaggcaacatgctgccaaacggggctgccttattgtgcgccag
tctttttttcacaatgagcctcgaaactttgttgatcttggtggaggagtttcaggatgc
cgaggtttccatgcaagcttccgggccacgcagggaggcctttcattgaacatggatgtg
tcaaccacaatgattgtgaagccaggagcagtgattgatttccttcttgccaatcaaaat
gcaaaagaaccttaccagattgattggtccaaggcaaagaggatgctgaagagtctgagg
atcaagaccagcccttcaaatagggaatacaaaatcaccggcgtcagtgataagccttgc
aatgagcagactttcacgttaaagcagaaaaatggggatgagggagtgcaagaggttgag
acgactgtgtatgattatttcacttatcatcgccgtattcctttacaatattctggagat
ttaccctgcattaacgttgggaaacaaaagcacccaacatatattcctcttgagctatgc
actctggtgtctctgcaacgctacaccaaggccctgtccaatctacaaagagcttccctt
gtagaaaagtcccgacaaaagccccaagagaggatgagagcattgaccgatgccctaaag
accagcaactataaggctgatccacttcttggatctgctggaatttcgatcagtgatcag
tttactcaagttgatggtcgtatcttgccaactccaaagttgagggtgggggatgatcaa
gacttgtttcctagaaatggaagatggaattttaaccagaagcgattggttgaaccggtc
aaacttgagcgttgggcagctgtgaacttttctgcccgttgtgatgttcgtaagctttgt
atggatctacaaaggtgtgggaaaatgaaaggaattttcatcagtccaccatttcagcat
atctttgaggagaatcagcagtacaggcgaaatcctgctcctgtgagagttgagaaaatg
ctagaagaattgaagtcaaaacttccagctccacctcagttccttctatgcattcttcca
gagagaaagaactctgacctttatggcccctggaagaaaaggaatttagctgatcttgga
attgttacacaatgcattgctccaacaaagatcaatgatcagtaccttaccaatgtgctc
ttgaaaatcaatgcaaagctgggtggcatgaattcctttttgactacagagctttcccct
acactacctcagatttccaaggtccccactattattattgggatggatgtctctcatggc
tcacctggacgagcagatgctccatccattgcagcggtggtcagctctagacaatggccc
tttatttcacgctatcgagcagctgtttgtacacagtcacccaagctggaaatgatagat
tctctgtacaagaaagtatcagataccgtagatgagggccttttcagggagctgctcagg
gacttctacgttagttctaaaaatgtgaaacctgagcatatcatcatcttcagagatgga
gtaagtgagtcccagttcaaccaagtcataaacattgagctcaatcagattatcgaggcc
tgtaatcatctggaagaaagttggtctccaaagttcactgtcattgttgcacaaaagaac
caccacacaagatttttccagaccaactcaccggataatgttcctcctgggactgtgatt
gacaatgcagtttgccatccaaagaccaatgacttctacatgtgtgctcatgctggacct
attggaacaacaagacctacacactaccatattctgcatgatgaaattggattctcagca
gatgacatgcaagagctggtccattcattgtcttatgtgtatcagagaagtaccacagcc
atctctgttgttgcacctatatgttatgctcacttggcagcagcacaggtggcacagttt
atcaagtttgatgaaatttctgaggccacctcgagccatggtggagtttcaacagctggt
actgtgctagtccctcaattgcctcggcttcacaagaatgttcgcagttcaatgttcttc
tgctaa
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