Solanum pennellii: 107028305
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Entry
107028305 CDS
T04130
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107028305
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107028305
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GRP
DUF1676
Motif
Other DBs
NCBI-GeneID:
107028305
NCBI-ProteinID:
XP_015084817
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Position
8:complement(2019008..2023842)
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AA seq
364 aa
AA seq
DB search
MATLNPFDLLDDDAEDPSLLVAAQQLKAPVASAPAKKGPVQHAKPAAKLPSKPVPPSQAV
REARSDGQRGGGRGGPRGGGRGRGRGRGFNQDFAADENAFGSNNGFSGRYSAPENGESGK
VSERRGGYGGSRGGFYGGRRGGFNNGDAGDGEIERPRRVFDRRSGTGRGNEYIKREGSGR
GNWGTTADDIAPETEVPVVDGEKIVEAEKQTGQEDAGDNNKDSTAAEPEEKEPEEKEMTL
EEYEKVMEEKRKSLVALKQEERKVNLDKELQSMLLLSNKKNDDEIFIKLGAEKDKKKEAV
EKAKKAQSINEFLKPAEGESYYRPGGRGRGRGRGRGNGGGYGGISSVSAPSIEDVGQFPS
LAVK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggctactttgaacccattcgaccttttggatgatgatgctgaggacccaagtttgcta
gttgctgctcagcagctaaaggctcctgttgcatctgcaccagccaagaagggtccagtt
cagcatgctaagcctgctgctaagttgccctccaagccggttcctccttcacaggctgtg
agggaagccaggagtgatggccagagaggaggaggccgcgggggtccacgtggagggggc
cgtggtcgtggacgtggacgtgggtttaaccaagactttgctgctgatgagaatgctttt
ggcagcaataatgggttctctgggaggtacagtgctccagaaaatggagaatcaggaaag
gtctctgaaaggagaggtggatacggtggatctcgtgggggcttctacggaggtcgtcgt
ggtggtttcaataatggtgatgctggtgatggagaaattgaacgcccaaggagagtgttt
gatcgacgaagtggcactggccgtgggaatgagtatattaaacgggagggctctggtcgt
gggaattggggaactactgcagatgatattgcaccggagactgaagtacctgttgttgat
ggtgagaagattgttgaggctgagaaacaaactgggcaggaagatgctggagataacaac
aaggattctactgctgctgagccagaagagaaggaacctgaggagaaggagatgaccctc
gaggagtatgagaaggtaatggaggagaagaggaagtctttggtggctctaaagcaggag
gaaagaaaggttaatttggacaaagaacttcaatccatgctacttctctcaaacaagaag
aatgatgatgagatcttcatcaaattgggtgctgagaaagataagaaaaaggaggcagtg
gaaaaagccaaaaaggcccaaagcataaatgagtttctaaagcctgctgagggtgaaagt
tactaccgccctggtggccgtggtaggggccgcggccgcggaagaggtaatggtggtgga
tatggtggaatcagcagtgtttcagccccatccattgaagatgttggtcaattcccctcc
ttggctgtcaagtaa
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