Solanum pennellii: 107028374
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Entry
107028374 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107028374 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107028374
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107028374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
107028374
NCBI-ProteinID:
XP_015084896
LinkDB
All DBs
Position
8:complement(61288628..61352767)
Genome browser
AA seq
2509 aa
AA seq
DB search
MEDKDTELLCKVSANHLFLAQFEPFRATIRSLRVRNPELSRVILQTIVANGGRFDSIIWS
QSCPSPALLTFLCTLELLQFNEPTSQLWSFDAAALKLRAEFCLILQNVISRVSESISSSE
LGAEAVDDVELNGHVSGINEDLKGLGECLRVLVKISDMGLRRLRPDLIEMDDVIDTGGDI
VVEEEEMMCLRRVFLENADIFDVLSLNIEKQVGWIENEDSDRAITVRTVVKHKEVEDKGL
KSLQKCIQTAHLDAMRECLMDNDVDGAVSHIRFLHLNYGITEEEYRVVSKDLLRRVLPGK
DDNGDARREMRSKFLSVYGEALSSRCTPLVKMIQVIHDEMLLEEIESVKGSESDQIPLPL
QHLQNFIQELNSETTLNSTNSLLETVITSCMREMYQYARVHGVHLLECVMDAALSAVRKQ
ELHEASNILLLFPRLQPLLAVLGWDLLSGKTDLRRKLMQLLWTSKSQVLRLEDSPNYGNR
SDEVSCVEHLCDLLCYQLDLASFVACVNSGRSWSLKSSLLLSGKEYLQQENEDAHWDPFV
ENFVLERLSVQSPLRVLFDVVPSIKFQDAIELISMQPITSNLSAWRRMEDIELMHMRYAL
ESAVLALGEMEKNLGEGVGNDQINLCYLKDLKNHLDAINNIFRKILMVNIIISLLHMDGL
SLNLTPCASSSTSSESSNISKEQQFEDAAQDGQNKTIVMLIGPLLNILRQYLPSSNSEKD
NNWKVNVSAGIKEAIEWRIMNAKRSIEDWEWRLSILQCLLPFSERQWRWREALTILRAAP
SKLLNLCMQKAKYDIGEEAVNRFSLPPEDKATLELAEWVDSAFGRASVEDAVFRAADGTS
PVQELDFSSLRAQLGPLPAILLCIDIAATSAKSSSISCKLLSQAEIMLSEIYPGNSPKIG
STYWDQIHEVAVISVIKRVLKRLQEQLEQDKPSALQDILTGEMILLSSKDLQRQGHKERA
LAMLHQMIEDAHMGKRQFLSGKLHNVARALADEETEMEQVKEEGSRSDRKGLLLYSKKGV
LGLGLKTFKQPLTTSATGDNNVPSGSYDVKETGKRLFGPFSSRMATFLSQFVLYLAAIGD
IVDGADTTHDFNYFSLVYEWPKDLLTRLVFEQGSTDAAEKAAEIMNADFVHEVVSACVPP
VYPPRYGHGWACMPVIPTYTEIYSENRVISPSCREAKPGSFTPSAGDAELPLYPLQLDIV
KHLIKLSPVRAVLACVFGSSILYRGRETTVSRSLKSCFLQTPDADRLFFEFALDQSERFP
TLNRWIQMQTNLHRISEFAIMADHTRNDGKDDVPECKTAMKRFRDHDSDAESEVDELAGS
SNISTNPQEIKNETRGSSDLRHDSLKSENSDRTIVFLSFDCENEGPYEKAVERLIDEGKM
MDALAISDRFLQNGASDQLLQLLIERGEENISGQSQGHSGNNNWSHSWQYCLRLKDKQLA
ARLALKYLHRWELDAALDVLTMCSCHLLENDPIKDEVVQMRQALLRYSHILSADNRFRSW
LEVESQCKEDPEGLALRLAEKGAVSAALKVAESEGLSIELRRELQGRQLVKLLTADPLNG
GGPAEASRFLSSLRDTADALPVAMSAMQLLPNLRSKQLLVHFFLKRRDNNLSELEVSRLN
SWALGLRVLAALPLPLQQKCSPLHEHPHLILEVLLMRKQLQSASLILKEFPSLRDNNMIL
RYAAKAIVVSISSPSRDPRISISTPKARQKTKLGTPTRSSFTSSLSNFQKEARRAFSWVQ
SGDKGTAKDRKRKSSGVMQSERVAWEPTTSIQEDRVTLFSADGQERLPAVAIAEMWMLTG
DPKKDEAVRSSHRYESTPDITLFKALLSMCSDESASAKGALDLCIGQMKSVLSSQKIPEN
ATMETIGRAYHATETFVQGLFFAKSLLRKISGSTDLSSNLERSREADDASSDAGSSSVGS
QSTDELSEVLGQAEMWLVRAELLQSLLGFGVAASLDDIADKESSEHLRNRLILDEKYSMA
VYTCKKCKIDVFPVWNAWGHALIRMERYTQARVKFKQALQLYKGDAATVIMEIIGTIEGG
PPVDVSSVRSMYEHLAKSAPAILDDSLSADSYLNVLFLPSKFPRAGRLKFFLEAFNDNFS
NSTYFEEPRSNLDSVRYAECISYFQDYARQHLFDFMFRHGHYKDACLLFFPPNSVPPPPQ
PSSSAVVTSSSSPQRQDPLATDYGTLDLLCELCIAYGAMPVLEEVLSGRTSNITTLDPSV
NKHTTAALSRICTYCETHKHFNYLYKFQVIKKDHVAAGLCCIQLFMNSSSQEEAIRHLEN
AKMHFEEGLSARHKAGESTKLITKGIRGKSASEKLTEEGLVKFSARVAIQIDVVRCFNDA
EGTQWKHSLFGNPNDPETFRRRCEIAETLAERNFDLAFQVIHEFNLPAVDIYAGVAASLA
ERKRGSQLTEFFRNIKGTIDDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLAC
VVCGRLKSAFQIASRSGSVADVQYVAHQALHANAHPVLDMCKQWLAQYM
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaagacacagagctgctgtgtaaagtcagcgcgaaccatctttttttagct
cagtttgagccatttcgagccactatacgcagtcttcgtgttcgaaatcctgaactttct
cgagtcattcttcagacaattgttgcaaatggaggaaggttcgattcgattatctggtct
cagtcttgcccgtctcctgcacttctcactttcctatgtacccttgaacttctccaattt
aacgaacccacttcccagctttggtcgttcgatgctgctgctcttaaattgagggctgag
ttctgtttgatcttacaaaatgtgatttcaagggtttcggaaagcatttcgagttcggaa
ttgggtgcagaagctgtcgatgatgttgaattaaatggacatgtttcgggcattaatgag
gatttgaagggtttaggtgaatgtttgagggttttagtgaaaatttctgatatgggtttg
aggcgcttgaggccggatttgattgaaatggatgatgtcatagatactgggggagatatt
gtagtggaggaagaggaaatgatgtgtttgaggagagtgtttcttgaaaatgcagatatc
tttgatgttttgtcactaaatatagagaaacaagttggttggattgaaaatgaggattcc
gatagggcgattacagtcaggacagtagtaaaacataaggaggttgaggataaggggctt
aaatcgctgcaaaaatgcattcaaactgcacatttggatgctatgagggaatgcctgatg
gataatgatgtggatggagctgtttcacatattcgatttctacatttgaattatggtatc
accgaggaggagtatcgtgtggtctcaaaagatctactcagaagggtgttacctggaaag
gatgataatggagatgccaggcgtgagatgcgaagcaaattcttgtcagtttatggggaa
gcactttcatctcgttgtactcctcttgttaagatgatacaggtaattcatgatgaaatg
ctcttggaagaaattgagagtgtcaaaggttctgaaagtgatcagattcctctacctctt
cagcatctccaaaattttatccaagagctgaattctgagacaactttaaacagcacaaat
tcattgctggagactgttattacttcttgcatgagagaaatgtaccagtatgctcgtgtt
catggcgtgcatttattggaatgtgtcatggacgctgccctgtctgccgtgagaaaacag
gaactgcatgaggctagcaatattcttttgctgtttccccggctccaacctcttctagcc
gtccttggttgggatcttttgtctggtaaaacggatttaagaaggaaattaatgcagctt
ctgtggacaagtaaatcacaagttcttcgtttggaggactctccaaactatgggaacaga
tcagatgaggtgtcctgtgttgaacatctctgtgatctcctttgttatcagcttgatctt
gcttcttttgtagcatgtgtgaattctggcaggtcatggagtttgaagtcgtcgctactg
ttgtccggtaaagagtatttgcagcaagaaaatgaagatgcgcattgggatccctttgtt
gaaaattttgtgctggaaagattatctgtacagagtcctttgcgggtattatttgatgtg
gttccaagcattaagtttcaagatgctattgaattgatcagcatgcagccaattacttcc
aatctatctgcctggaggaggatggaagacattgaactcatgcacatgcgttatgctttg
gaatctgctgtccttgcacttggagagatggaaaagaatttaggggagggagtaggaaat
gaccagatcaatttgtgctacctgaaagatttgaagaaccatcttgatgccatcaacaac
attttccgcaagatattgatggtgaacattatcatctctcttctgcatatggatggtctc
tctctcaatttgacaccttgtgcttcatcaagcacctcatctgagtcatccaatatctct
aaggagcaacaatttgaggatgcagctcaagatggacaaaacaagaccattgtaatgtta
atagggccactattgaatattttacggcagtatctaccatcttcgaactcagagaaggat
aataattggaaagtaaacgtatctgctggtattaaagaagccatagaatggagaattatg
aatgcgaaaagatctattgaggactgggaatggcgtttgtcaattttacagtgccttctg
ccattctcggaaagacagtggagatggagggaggctcttactattctacgtgcggcccca
tcaaaactactaaacctctgtatgcaaaaggcaaagtatgatattggagaagaggctgtc
aaccgtttctctttgcctccagaagacaaagctacactagagctagctgaatgggtagat
agcgcctttggaagagcatctgttgaagatgctgttttccgtgctgctgatggaacttct
ccagtccaagaattggatttctcttctttacgtgctcagctaggtcctctaccagctatt
ctcctgtgcattgatatagctgcaacttctgcgaaatcttcaagcatatcctgtaagctt
ttaagtcaggcagaaattatgttgtcagagatctaccctggtaattcccctaaaattggg
tcaacctactgggatcagattcatgaagtagcagttatatctgtaatcaagcgcgtcctt
aagcgtctacaggaacaactggagcaggataagccttcagctcttcaagacattttaact
ggagaaatgatccttttatcctcaaaggatcttcagcgccaaggacataaggagcgtgca
ctagctatgctgcatcaaatgattgaagatgctcatatggggaagagacagtttctaagc
ggtaagctccacaatgtggcaagagctttagctgatgaagaaacagagatggaacaggtt
aaggaggagggctcacgatctgacagaaaaggattgttactgtacagcaaaaagggggtt
cttgggcttgggttgaaaaccttcaagcagccgctgacaacttcagcaactggtgacaat
aatgtaccttctggtagctatgatgtcaaggaaactggaaaaagattatttgggccattc
agctccagaatggccacgtttctctctcaatttgtcctctaccttgctgctattggtgac
attgttgatggggctgataccactcatgactttaactacttctcacttgtgtatgaatgg
cctaaagaccttttaactcgtctagtgtttgagcaaggaagtactgatgcagctgaaaag
gcagcagagattatgaatgctgattttgtccatgaagtggtttctgcttgtgttcctcca
gtttatcctccaagatatggtcatggttgggcttgcatgccggtaattcctacatacaca
gagatctactctgaaaatagagtaatatccccttcatgtagagaggccaagcctgggtct
ttcactccttccgctggggatgctgaattacctctctatcctctccaactggatatagtg
aaacatcttatcaagttatccccagttagagctgtattagcatgcgtctttggaagttct
atactttatcgtggcagggagactactgtatctagatctctgaaaagttgctttctacaa
actcctgatgctgataggttattctttgagtttgctcttgaccaatctgagaggttccct
accttgaatcgctggatacagatgcagaccaatcttcatcgaatctcagaatttgcgata
atggctgatcacacgaggaatgatggtaaagatgatgtacctgaatgtaaaactgctatg
aagcgatttcgtgatcatgacagtgatgctgaatctgaagttgatgaacttgctggtagc
agtaatatatcaacgaatccccaggagattaagaatgaaacgagaggatcttctgatctt
aggcatgattccttaaaatccgaaaattctgatcgtacaatagtttttctttcttttgat
tgtgagaatgaaggcccatatgagaaagctgtggaacggttgattgatgaaggaaaaatg
atggatgctctcgcaatttctgatcgtttcttgcaaaatggagcctcagatcagttgctt
cagttgctaattgaacgtggagaagaaaatatatctggacagtctcaaggtcattcaggc
aacaataattggagccacagttggcagtactgtctccgtttgaaagataaacaattggca
gctagacttgcgctcaaatatttgcatagatgggaactagatgctgctttggatgttctc
actatgtgcagttgccacttgcttgaaaatgatcctattaaagatgaggttgttcagatg
agacaagctctcctaaggtacagccatatattaagtgcagataaccgcttccgcagctgg
ttagaggtggagtctcagtgtaaagaagatcccgaaggtcttgcccttagattagctgag
aagggagctgtttctgctgctttaaaagttgctgaaagtgaagggctatctattgaactg
cgcagagagctgcaggggcgtcaacttgtgaagcttctcactgcagatcctttaaatggt
ggaggccccgcagaagcttcacgttttctttcttctttacgtgacactgcagatgcttta
cctgttgcaatgagtgcaatgcagcttttgcccaaccttcgatcaaagcagcttctcgtt
cactttttcctcaaaagaagagataataatttatcagagttggaagtttccaggctcaac
tcttgggcattaggattacgtgttctggctgctttgccattaccgttgcagcaaaaatgc
tctccgctacatgagcaccctcatttaattctagaggttttgttgatgagaaaacaactt
caatctgcttctctgatacttaaggaattcccctccttgagagacaacaatatgattctg
agatatgctgctaaagctattgttgtcagcattagttctccttccagggacccgaggatt
tcaatttcaactccaaaagcaagacagaagacaaaattgggaacacccacaaggtcatca
ttcactagtagccttagtaattttcaaaaagaagcccgcagagcattttcttgggttcaa
tctggagataaaggtacagccaaggataggaagagaaagagctctggagtaatgcaatca
gagagggtggcttgggagccaactacttccattcaggaagaccgtgttacattattttct
gcagatgggcaagaacggctgcctgctgttgcaattgctgagatgtggatgctcacaggt
gacccaaagaaggatgaagctgtccgttcttctcaccggtatgaaagtaccccggatata
actcttttcaaggccctgctttcaatgtgttcggatgagagtgcatctgccaaaggtgct
ttggacttgtgtataggccagatgaaaagtgtattaagctcccaaaagatacctgagaat
gcaactatggaaactattggccgagcatatcatgccacagaaacttttgttcagggcctg
ttttttgctaaatcccttcttagaaagatttctggaagcactgacttgtctagtaatttg
gaaagaagtcgggaagcagatgatgcatcttctgatgctggcagctctagtgtgggtagt
caatcgacagatgagctgtctgaagtactgggacaagctgagatgtggctagtacgtgct
gaattgctgcaaagtcttttgggtttcggagtagctgcctcacttgatgatatcgctgat
aaagagtcatctgagcatcttcggaatagattaattctagatgagaaatacagcatggct
gtttacacttgcaagaagtgtaagattgatgttttccctgtgtggaatgcatgggggcat
gctctgattaggatggagcgctatacacaagctcgtgttaaatttaagcaagcacttcaa
ttatacaagggtgatgctgcaactgttataatggagattattggcaccattgaaggaggt
ccaccagtggatgtttcatctgttcggtccatgtatgagcatctggctaaaagtgcacca
gccattttagatgattctctttctgctgattcctatctcaatgtgttgttcctaccatcc
aaatttccacgggcagggagactcaagttctttttagaagctttcaatgacaatttttcc
aacagtacgtacttcgaagaacctaggagcaacttggacagtgttagatatgctgaatgc
atcagttattttcaagattatgctcgccaacatctgtttgatttcatgtttcgacatggc
cattacaaggatgcttgcttgttatttttccctcccaattctgttcctccacctcctcaa
ccatcttcatcggctgttgtcacttcgtcttcttcccctcaacgacaagatcctttggct
acagattatgggacccttgatctattgtgtgaattgtgcattgcttatggggccatgcct
gttttagaggaagtattgtcaggaagaacttcaaatataactacactagatccatcagtg
aacaaacatacaactgcagcactttctcgcatctgtacttattgtgaaactcacaagcat
ttcaattatttatacaagtttcaggtgataaagaaggatcatgtggcagctgggctttgt
tgtatacaattgtttatgaactcttcttctcaagaagaagctataagacacttggagaat
gccaagatgcatttcgaggaaggcttgtcagcacgacataaagcaggagagtctactaag
cttattaccaagggcatccgagggaaaagtgcctctgagaaactaactgaagaaggacta
gtcaaattttctgctagagttgctatccagatagatgttgtcagatgctttaatgatgca
gaaggaacacagtggaaacattcactttttgggaatccaaatgatcctgaaactttcagg
aggaggtgtgaaattgcagaaactcttgctgagagaaattttgacttggctttccaggtg
atccatgagttcaaccttccagctgttgatatatatgctggtgttgctgcatcacttgct
gagagaaagaggggaagccaactcacggagttctttaggaacattaaaggcaccatcgat
gatgatgattgggatcaggttttgggggcagccattaatgtgtatgcaaacaaacacaaa
gagcgacctgaccgcctgattgacatgttgactagtagccacaggaaagtacttgcatgt
gttgtttgtgggcgtctcaaaagtgcattccaaattgcatctagaagtggaagtgtggca
gatgttcaatatgttgcacatcaggcattacatgctaatgcacatccagttcttgatatg
tgcaagcaatggctcgcccagtacatgtag
DBGET
integrated database retrieval system
