Solanum pennellii: 107028410
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Entry
107028410 CDS
T04130
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
spen
Solanum pennellii
Pathway
spen04016
MAPK signaling pathway - plant
spen04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107028410
04075 Plant hormone signal transduction
107028410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107028410
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107028410
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At1g61320_AtMIF1
LRR_RPS2
F-box-like
LRR_At5g56370
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
107028410
NCBI-ProteinID:
XP_015084951
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All DBs
Position
8:complement(48204898..48208443)
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AA seq
665 aa
AA seq
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MSKVFNFSGDHGGTVYPSPKKSSLFLSLRNHVDVYFPPCKRSRVAVPFVFSEKKHKLSSI
DVLPDECLFEVLRRLSDGKDRSASACVSKRWLMLLSSIRGDETVISNPNPSLETEERSIQ
TALVKSVDCVKKGEVVDSSAAEVAEAESQDIEGEGHLSRCLDGKKATDVRLAAIAVGTPG
HGGLGKLSIRGSNPIRGVTDTGLKAIARGCPSLRALSLWNVSSVSDEGLTEIAQGCHLLE
KLDLCQCPAITDMSLMAIAKNCPNLTSLTIESCSKIGNETLQAVGRFCPKLKFVSLKNCP
LIGDQGIASLFSSAGHVLTKVKLHALNISDIALAVIGHYGIAITDIALIGLQNINERGFW
VMGNGQGLQKLRSLAITACHGVTDLGLEALGKGCPNLKLFCLRKCTILSDNGLVAFAKGS
VALENLQLEECHRITQAGFVGVLLSCGEKLKVLSMVKCFGVKELACRFPSVLPCNSLQSL
SIRNCPGVGNATLAIMGRLCPKLTHLELSGLLQVTDEGLFPLVQSCEAGLVKVNLSGCVN
VTDRSVSFITELHGGSLESLNVDECRYVTDMTLLAISNNCWLLKELDVSKCGITDSGVAS
LASTVRLNLQILSLSGCSMLSDKSVPFLQKLGQTLMGLNIQHCNGVSSRCVDLLLEQLWR
CDILS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtcttcaattttagtggtgaccatggtgggactgtgtacccaagtcccaag
aaatccagcctatttctgtcccttaggaatcatgtggatgtctattttcctccttgcaag
aggtctcgtgttgcggtcccttttgttttcagtgaaaagaagcacaagttgtcttccatt
gatgtcctacctgatgaatgcctttttgaggtattgaggcgcctttctgatggcaaagac
aggagtgcctctgcttgtgtttccaagcgctggcttatgcttttaagcagcatccgcggg
gatgaaacagtaatctcaaatcccaatccatctttggaaaccgaggaaagatctatccaa
actgctcttgttaagtctgtggactgtgttaagaagggtgaggtagtggactcgagtgct
gcagaagttgctgaggctgaatctcaagatattgaaggagagggtcatctttccaggtgc
cttgatggaaagaaagcaacagatgtccgacttgctgctattgctgttggaacaccaggc
catggagggttaggaaagctttctattcgaggaagtaacccaatccgtggtgtgactgat
acaggcctcaaggctattgctcgaggttgtccttctctaagggctctttctctctggaat
gtctcttctgttagtgatgaaggtttaaccgagattgctcaaggatgtcatctgttggag
aagcttgatctttgccaatgccctgcaattactgatatgtccttgatggctatcgcaaag
aattgtcctaatttgacctctctaacgatagaatcttgttcaaagattggaaatgaaact
cttcaagctgtaggtcgtttttgccctaagttgaagtttgtgtctctcaaaaactgccca
ctcatcggagatcaaggaattgcaagtctcttttcatctgctggtcatgttttgacaaag
gtgaaacttcacgcattgaacatcagtgacatcgcccttgctgttattggacattatggc
attgccatcactgacatagcccttattggtcttcaaaacataaatgagagaggattttgg
gtcatgggtaatggccaaggtttgcagaagctgaggtcgcttgctataactgcttgccat
ggagttactgatttgggacttgaagctcttggtaaaggttgtccaaacttgaagctgttt
tgcctacgaaaatgtacaatcctgtcagataatggcttggttgcttttgccaaaggttca
gttgcactcgagaacctccaattagaagaatgccacaggatcacccaggctgggtttgtt
ggtgttcttttgagctgtggtgagaagttaaaggttctgtccatggtgaaatgctttggt
gttaaagagttggcctgtcgatttccatctgtgttgccttgcaactcacttcagtctttg
tctatccgcaactgtcctggagttggtaatgctactttggccataatgggtaggctgtgc
cccaaactgactcatttggagctgagtggactccttcaagtaactgatgagggtcttttc
cctcttgttcagagctgtgaagctggtttggtcaaggtgaatctaagtggatgtgttaat
gttacagacagatcagtttcattcataactgagttgcatgggggaagtctcgagtctctt
aatgttgatgagtgtcgatacgttactgatatgaccttgttagcaatttccaacaactgt
tggttgctcaaggaacttgatgtttcaaagtgtggtataactgattcaggtgttgcatct
ttggccagtacagtgcgacttaatttgcagatcctctccttgtcaggttgctctatgctt
tcggacaaaagtgtaccctttctgcagaagttggggcagacactcatgggcttaaacatc
cagcactgcaatggggtcagtagcagatgtgttgatctcctcttggaacagctctggagg
tgtgatatcctttcttaa
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