Solanum pennellii: 107028417
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Entry
107028417 CDS
T04130
Name
(RefSeq) vacuolar protein sorting-associated protein 25
KO
K12189
ESCRT-II complex subunit VPS25
Organism
spen
Solanum pennellii
Pathway
spen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107028417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107028417
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107028417
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
107028417
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107028417
Exosomal proteins of colorectal cancer cells
107028417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ESCRT-II
GntR
Motif
Other DBs
NCBI-GeneID:
107028417
NCBI-ProteinID:
XP_015084959
LinkDB
All DBs
Position
8:complement(64534976..64540349)
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AA seq
179 aa
AA seq
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MQKLGEFKLPNFFNYPPYFTLQPVRETREKQIQLWKELIIDFCRTQKIFVIALEVDFPLF
SNAAIERSLSHEAREAFLSALVSDGRAEWMDKGHRKCLVLWHRIQDWADLIVNFVKENGL
EDSVMTVEEIRSGVESRGTELHGIDRTVLMRALKVLEHKGKLAIFKGTSADDEGVKFSV
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagctaggcgaattcaagctgcctaacttctttaattatccaccctacttcact
ttgcagcctgtgagggaaactagggagaagcagatacaactatggaaagagctcataatt
gatttctgtcgaacccaaaagatctttgtaattgcgctggaggtagactttccattgttc
agtaatgctgctattgaaagatctctgagtcatgaagctagggaggcatttctctcggct
ttggtttctgatggtcgtgcagaatggatggataaaggtcatagaaaatgcctagttcta
tggcatcgtattcaagactgggcagacttgattgtaaactttgtgaaggagaatgggctg
gaagacagtgttatgacagttgaagaaatacgttctggggtggagtcccgtggaacagag
cttcatggaatagaccgtacagttcttatgcgagctttgaaggtgttggaacataaagga
aagcttgcaatatttaagggaacatcagctgatgatgaaggtgtcaaattttctgtgtaa
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