Solanum pennellii: 107028419
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Entry
107028419 CDS
T04130
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
spen
Solanum pennellii
Pathway
spen04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107028419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107028419
Membrane trafficking [BR:
spen04131
]
Endosome - Golgi transport
Others
AP-4 complex
107028419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
HEAT
Cnd1
HEAT_2
INTS1_R4
HEAT_EZ
TOR1L1_N
PDS5
RGS
DUF4290
NPHI_C
Motif
Other DBs
NCBI-GeneID:
107028419
NCBI-ProteinID:
XP_015084960
LinkDB
All DBs
Position
8:63679676..63696251
Genome browser
AA seq
968 aa
AA seq
DB search
MGSQGGFGQSKEFLDLIKSIGEARSKAEEDRIVINEIEILKKRIIEPDIPKRKMKEYIMR
SVYVEMLGHDASFGYIHAVKMTHDDNLHLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCAALNAVCKLINEETIPAVLPQVVDLLGHSKEAVRKKAVMALHRFHQKSPSSV
SHLVSNFRKRLCDNDPGVMGSTLCPLYDLISEDVNSYKDLVVSFVSILKQVAERRLPKSY
DYHQMPAPFIQIKLLKILALLGSGDKKASEQMYTIVGDIMRKSDSSSNIGNAILYECICC
VSSIHPNPKVLETAAEAVAKFLKNDSHNLKYLGIDALGRLIKISSEIAEPHQLAVIDCLE
DPDDTLKRKTFELLYKMTKPSNVEVIVDRMIDYMMSISDNHSKTEIASRCVELAEQFAPS
NQWFIQTMNKVFEHAGDLVNLKVAHNLMRLIAEGFGKEDDTADSQLRLSAVESYLRIMGE
PKLPSAFLQVICWVLGEYGTADGKYSASYITGKISDIAEAHSTDDMVKAYAVSALMKVYS
FEIAAGRKVDILPECQSFIEELLASNSTDLQQRAYELQSVIGLDARAVENIIPMDASCED
IMVDRELSFLNGYVEESLKKGAQPYIPESERSGALSISSFRVEELHGSSGHSLRFEAYEL
PKPSVPSKPPVPPVSSTELVPVPEPTYHREFHEAVAPKFSVSGTGSSEIKLRLDGVQKKW
GKQTYSSSSPSTTDSDTYKTQNGATQRDVTSSLSSKTRDVSYDSRRQQEEINPEKQKLAA
SLFGGVSKTEKRPAAGHKTSRPSSRVADKSHAEKSGPSDGGAVKASPQPPPDLLDMGEPT
SISNATFVDPFKQLEGLLDLNEGTAALSSSSATKAPDFMSLYGDTSLSGQNMGMTDLLST
GSGDANLISGISHAPDKNGHGTGSAVTLPAQLSKGPNTKEALEKDALVRQMGVNPTSQNP
NLFKDLLG
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccaaggaggatttggacagtcaaaagagtttcttgacctgattaaatcaatt
ggagaagcccgatctaaagctgaagaagatcgaatcgtgattaacgagatcgaaattctc
aagaaacgaatcattgagcctgatatacctaaaaggaagatgaaagagtatataatgaga
tcagtgtatgttgaaatgttaggacatgatgcgtcatttgggtatatacatgctgtcaaa
atgacgcatgatgataatttacatcttaagcgtactgggtatttagctgtcacacttttt
ttgaatgaagatcatgatttgattatcttgattgtgaatactattcagaaagacttgaaa
tcagataattatttggtagtttgtgctgcattgaatgctgtttgtaagttgattaatgag
gagactattccagctgtgttgcctcaggtggtggatttattggggcattcaaaagaagct
gttaggaaaaaggctgttatggcacttcaccggtttcatcagaaatcaccatcttctgtt
agccatcttgtctccaattttagaaagaggctatgtgacaatgatcctggtgttatgggc
tctacactatgccctctttatgatcttatctcagaggatgttaattcttacaaggatttg
gtggtaagctttgtaagcattctaaaacaagtagcagagcggagattgcccaagagttat
gattatcatcagatgcctgctccattcattcagatcaaattattgaaaattctggcatta
ctcggaagtggtgacaaaaaagccagtgaacaaatgtatacaattgttggtgacattatg
agaaagagtgattcatcaagtaatataggaaatgctattctgtatgagtgcatatgctgt
gtttcctcaatacatcctaaccccaaggttttagaaactgcggcagaagcagttgccaaa
tttttgaagaatgatagccataatctaaagtacttggggattgatgcgcttggtagatta
ataaagataagttcagaaattgctgagccgcaccaactggctgtgattgattgtttagag
gacccagatgacacactgaagcggaagacttttgagctgctgtataaaatgacaaagcca
tcgaatgtagaagttattgttgaccgtatgattgattacatgatgagtataagtgataac
cattctaaaactgagatagcatccagatgtgtcgagcttgctgagcagtttgcaccgagc
aatcaatggtttatccagaccatgaataaggtgtttgagcacgcaggagatctagtgaat
ttaaaagttgcccacaacttgatgcggctgattgctgagggatttggaaaagaagatgac
actgcagatagccagctgagattatcagctgtggagtcttatttgcgtatcatgggagag
ccaaaacttccctctgcatttcttcaggttatttgctgggtcttgggggagtatggtact
gctgatgggaagtattctgcctcctatatcacagggaaaataagtgatattgctgaggca
cattcaactgatgacatggtcaaggcttatgcagtatcagcacttatgaaagtatattca
tttgaaatagcagctgggaggaaagtggacatcttgcctgagtgtcagtcattcattgaa
gagttgttagcatcaaactcaacagatctacaacaacgagcatatgaacttcaatcggtt
attggcttagatgctcgtgctgttgaaaatattattccaatggatgctagctgtgaagac
atcatggttgatagagaactatcgtttctcaatggttatgttgaagagtcactgaaaaaa
ggggctcaaccctatattcctgagagtgagcgatcaggagctttaagtatcagcagtttt
agagttgaagaactacatggatcatcgggacattctcttagatttgaagcatatgagctt
ccaaaaccttctgtaccatcaaaacccccagtcccaccagtatcctcaaccgaacttgtt
cctgtaccagaaccaacttatcacagagagtttcatgaggctgttgcaccaaaattttcc
gtgtctggtacaggctcatctgaaatcaagctacgacttgatggtgttcaaaagaagtgg
ggtaagcaaacttattcctcttcctcaccatctactacagactctgatacctataagact
cagaatggagcgacccagcgtgatgtaacaagcagcttaagctcaaaaacacgtgatgta
tcttacgactcaagaaggcagcaggaggaaattaatccggaaaagcaaaaacttgctgca
tccctctttggtggtgtatcaaaaactgaaaaaagacctgctgctggccacaagacatca
aggccaagcagccgtgttgcagacaagtctcatgcagaaaagagtggaccttccgatgga
ggtgctgtaaaagcaagtccccaaccacctccagacttgctcgacatgggtgaacctact
agtattagtaatgcaacttttgtggatcctttcaagcaattagaagggttgcttgattta
aatgaaggaactgcagctttaagttccagtagtgctactaaagcacctgattttatgtct
ctttatggtgacacttctttaagtgggcagaatatgggaatgacagatctcctttcaact
ggtagtggtgatgcaaatcttatctctggaatttctcatgcacctgacaagaatggccat
gggacaggaagtgcagttactctgccagcacaattaagcaagggaccaaatactaaagag
gctttggaaaaagatgcacttgtgagacaaatgggtgtgaacccaacaagtcagaatccc
aacttattcaaggatttgcttgggtaa
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integrated database retrieval system
