Solanum pennellii: 107028463
Help
Entry
107028463 CDS
T04130
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spen01001
]
107028463
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107028463
Enzymes [BR:
spen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107028463
Protein kinases [BR:
spen01001
]
Serine/threonine kinases: Other
Other
107028463
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107028463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
LisH
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Motif
Other DBs
NCBI-GeneID:
107028463
NCBI-ProteinID:
XP_015085024
LinkDB
All DBs
Position
8:complement(62684524..62698134)
Genome browser
AA seq
1969 aa
AA seq
DB search
MEEEPQQQQSLAAEGEEERQTETVPTEEHKEEGEEAGGGEEDEEEAESEGLIIKAQALME
KITALPDNPNPNTIHALSSLFETQEASYMEENGHAAPNNGRSSHNVGRLGNLIRDNDEFF
ELISSKFLTERRYSVSVKAAAARLLFSCSLTWMYPHVFEDPVLENLKSWTTDDTIRLSGD
DHYWKHESGDRRSSDSEMLKTYSTGLLAVCLASGGQVVEDVLTSGLPAKLMHYLRIRILG
ETTTSQRDATSLLDGKASSTGTGVRAREECRSRFRQVAESSHLDIPRVAEDGLHGDQVLD
KDRDRSASRHMHGDERWTDEEPPDSMAMDDDNCQADGDGEERWHIRDLRDGKAKPGNRSV
REDEYDESARDELSRRRVNRGWTRHRGRGRVTEGVPDNEAALTSPGSASRLSGQSRSRNL
NRNQELRRAPDNKKNLSRTNVDGFGMERDENDECFRECKVGSKDITDLVKKAVGAAETEA
KTANAPAEAVKAAGDAAAEVVKSAAFEEFKKSNDDEAAVLAASKAASTVIDAAIAVEVSR
SAISEGESQDIKATAQEANEDVDEFFILDSDSLAKLREKFCIQCLIILGEYVEVLGPVLH
EKGVDVCIGLLQRNSKHKEGCKLSLLLPDVLKLICALAAHRKFAAVFVDRGGMQKLLAAP
RAPQTFCGLSSCLFAIGSIQGIMERVCTLPSSIIHQVVELALQLLECPQDLARKNSALFF
AASFVFRAVVDAFDAQDGLQKMLNLLQDAALVRSGASSGALTASGSLRSDRSPPEVLTAS
EKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSVRSAGRNIPSVRAASKPLDISNEAMDAV
SRLIQKDRRLGPAAVRARWPVVDKFLNCNGHITMLELCQAPPVERYLHDLLQYALGVLHI
VTLVPYSRKLIVNATLSNERVGIAVILDAANSAGYVEPEIVEAALNVLVCLVCPPPSISN
KPSVSTQAQQTNAVQSANTPGVETRDRNADRSETRDRNAERILPDRAVNVSSQNENREST
LPDRGSTAVPGTSAVSGTSQGPVSTVTSGLVGDRRISLGAGAGCAGLAAQLEQCYRQARE
AVRANNGIKVLLQLLQPRIVTPPAAIDCLRALACRVLLGLARDDTIAHILTKLQVGKKLS
ELIRDSGNQTPGSEQNRWQAELAQVAIELIGVVTNSGRASSLAATDAATPTLRRIERAAI
AAATPITYHARELLLLIHEHLQASGLTDTATMLLKEAQLTPLPSLAAPSSLAHQTSGQET
SSVQIQWPSGRAPRGFLSAKPKLPPLDEDGGLKSESIVCSSRRKPLAFSSARSLSSKSFP
VEVSPSTSGCKFSNSRKCATPIATSETPLLSTVKAGGDPDIMFKTPIVLPMKRKLTDLKE
SGSVSSVKRLNTGEHTVRSPVCVTPNSFRRSGLPSDTNVPSTPNSTLREIHNRPGSSAFP
TEGDDTPMLSSSQHGLLSDSQPSNAERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHP
HVCPEPKRSLDAPSNVTSRLSTRDFRSLNGGTHGKRKDRQFVYSRFRPWRTCRDDAGVLL
TCVSFMGDSSQIAAGTHSGELKIFDTNSSSILESFTSHQAPLTLLQSYLSVETQLLLSSS
SHDVRLWDATSVSAGPKHSFEGCKAARFSNFGTTFAALSAEQSRREILLYDTQTCQVELK
LTDTSNIPSGRGHMYSLAHFSPSDNMLLWNGVLWDTRGSGPIHRFDQFTDYGGGGFHPAG
NEVIINSEVWDLRNFRLLRSVPSLDQTVITFNASGDVIYAILRRNLEDVMSAFQTRRVKH
PLFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLVTMDDQDEMYSSARVYEIGR
RRPTEDDSDPDDAESEDEDEDDDDDIDEEAILGTDLDGDGESDADDLSNDDDSVSELDDE
EDEDGDFIVDGVDFGGGGILEIVTDGEDEDDSELVESFSSGDDDDDDLL
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagccgcaacaacaacaatcattggcggcggaaggtgaggaggagcggcag
acggagacggttccaacggaggagcataaggaggaaggagaagaagcgggaggtggagag
gaagatgaagaagaggcggaaagtgaagggttgatcattaaggcacaagcgttgatggag
aagattactgctttgcctgataaccctaaccccaatactatccatgctctttcttctctt
tttgaaacccaagaagctagttacatggaagagaatggtcatgctgctcctaataatggc
cgatcttcccataatgttggacggctagggaaccttatccgggacaatgatgaattcttt
gaactgatatcttcgaagttcctaactgagaggagatattcagtttctgtgaaggctgct
gctgcaaggctgctttttagctgttcactgacatggatgtatccacatgtttttgaagac
cctgtgcttgaaaatttaaaaagctggacaacggacgacacaatcagattatctggtgat
gatcattactggaagcatgagtcaggtgatcggaggtcctccgattctgagatgctgaag
acctactctactggacttcttgctgtatgtttggcaagtggtggtcaagtagtcgaagat
gtattaacatctgggctcccagcaaaactcatgcactatcttcggattagaattttaggg
gagaccaccacaagccaaagagatgcaacatctttgttggatggcaaagcatcatctaca
ggtactggtgtgagagctagagaggaatgtagaagtagattccggcaagttgccgaaagt
tctcatttagatatacccagagtagcggaagatggacttcatggtgatcaagttctggat
aaggatcgcgatagaagtgccagtaggcatatgcatggggatgaacgttggacagatgaa
gagccacctgattctatggctatggatgatgataattgtcaggcagatggagatggtgaa
gaaagatggcatattagagatttacgtgacggaaaggcaaagcctggtaacagatccgta
agggaagacgaatatgatgagagtgctagagatgagttgtcaagacgcagggtgaatcgt
gggtggacaagacacagaggacggggaagggtgactgagggtgttccggataatgaagca
gctttgacctctccagggtctgctagtagattgagtgggcaatctcgcagtagaaattta
aaccggaatcaagagttgagaagagcacctgataacaagaagaatttgagtaggacaaat
gttgatggttttgggatggagagggatgaaaatgatgaatgtttccgagaatgtaaagtc
ggctccaaggatatcacagatctagtgaagaaagctgttggagctgctgaaacagaagca
aaaacagctaatgctccagcggaagctgttaaagcagcaggcgatgctgctgcagaagta
gtcaagagtgctgcttttgaggaatttaagaagtcaaatgatgatgaggctgcagttttg
gctgcttcaaaagctgcatctacagtcattgatgctgctattgctgttgaagtttcaagg
agtgctatttctgaaggtgaatcacaagacataaaagcaacagctcaagaagcaaatgag
gatgttgatgaattcttcattctggatagtgactctcttgcaaagttgcgagagaagttc
tgcatccagtgtcttattattttgggagagtatgttgaagttcttggtcctgtattgcac
gaaaaaggagtcgacgtgtgtattgggctactgcaacgtaattccaagcataaagagggg
tgcaaactttcacttcttttgcctgatgttctgaagctgatctgtgctttggctgcacat
cggaaatttgctgcagtatttgtggatcgtggcggcatgcaaaaattgcttgctgcccca
agagctcctcagactttttgtggcctttcttcatgcttattcgctatagggtcaattcag
ggaataatggaacgtgtttgcactcttccttcaagcattattcatcaggtggttgagttg
gcgcttcagcttcttgaatgtcctcaagatctagccagaaaaaattctgccttgtttttt
gcggcttcatttgttttcagagctgtcgtagatgcttttgatgctcaggatggtttacag
aaaatgcttaatctcttgcaagatgctgcattagtgaggtctggagcttcttcgggggca
ttaacagcttcagggtcattacggagtgacagatcaccaccagaggttctgactgcttct
gagaagcagatagcatatcacacatgtgtcgcacttcgacagtacttcagagcacatctt
ctcttgctggtggattcaattcgtcctaataaaagtgttcgcagtgctggacgaaatatc
ccaagtgttcgggctgcatctaagcctcttgacattagtaatgaggctatggatgcagtt
tcccgtttaatccagaaagatcggagacttggtcctgcagctgttagagcccgctggcct
gtagttgacaagtttttaaattgcaatgggcatattacaatgttggaattatgtcaggct
ccacctgttgagcgttatttgcacgacttgcttcagtacgctcttggtgtacttcatatc
gtcactttagtaccttacagccgtaaacttattgtaaatgcaacattaagcaatgagcgt
gtgggtatagctgttatattggatgcagctaacagtgccggttacgtagaacctgagatt
gttgaagcagcattgaatgtgttagtttgtcttgtatgtcctccaccttcaatcagcaat
aaaccatctgtatctacacaagcacagcaaaccaatgctgtccaatctgcaaacactcct
ggtgtggagaccagagaccggaatgcagaccggagcgagaccagggacagaaatgcagag
cggattcttccagatcgagctgttaatgtctccagtcagaatgaaaatagagaatctact
ttaccagatcgtggaagcacagcagttcctggcacatctgcggtcagtggcacttctcaa
gggcccgtgtctacagtgacatcaggattagttggagaccgaagaatatcactaggtgca
ggagctggttgtgctggccttgctgctcaacttgaacaatgttaccgtcaagcgagagaa
gctgttagggcaaacaatggtattaaggtcctcctgcagctcctccagccacggatagtt
actcctccagctgcaattgactgtcttcgtgctcttgcttgccgagtacttcttggtttg
gctagagatgatacaattgcacatatactaacaaaacttcaggttgggaagaagttgtca
gaactcatacgagattcaggaaatcagactcctggcagtgaacagaaccggtggcaagca
gaacttgcacaggtggctattgagcttattggggttgtaactaattcgggccgtgcaagt
tctctggctgctacagatgctgcgacccccacattaaggcgtatagagagagctgctata
gctgctgctactccgatcacatatcatgcaagggaacttttactcctcatccatgaacac
ctacaagcttctggtctgacggacactgcaactatgcttcttaaggaggctcagttgaca
cctttgccatctttagccgctccatcatctctggcacatcaaacatcagggcaggagaca
tcgtcagttcaaattcagtggccatctggtcgtgcacctagaggatttttgtcagctaaa
ccgaaacttccgccattggatgaggatgggggattgaaatctgagtcaattgtctgttct
tcaagaaggaagccattggccttttcatctgctcgtagtttgtcctcaaaatcttttcct
gttgaagtctctccatctacatcaggctgcaaattcagtaattcgagaaagtgtgccaca
cctatagctacatcagaaactccattactatctacagtgaaagctggtggagatccagac
atcatgtttaaaactcccattgtattgccaatgaaacgcaagttaactgatctgaaggaa
agtggatcagtatcgtcagttaagcgactcaatactggtgaacatacagtcagatctccg
gtttgtgtcactccaaattcgttccgtagaagtggtctaccatcagatactaatgtgcct
tcaacaccgaattctactttgagagagatccataatcgacctggctcaagtgcttttcca
actgaaggtgatgatactcctatgctgtcgtcttctcaacatggtcttctaagtgactca
caaccctcaaatgcggagcggttaaccttggactctctggttgttcagtacttgaagcac
cagcatcgccaatgtcctgctcccatcacaacgttaccgcctctttcgctcttgcaccct
cacgtctgtcctgaaccaaaacgaagccttgatgcaccatcaaatgtaacatcacggctt
agtactcgtgattttagaagtttgaatggtgggacacatggaaagcgtaaggatcgacaa
ttcgtctacagtagatttcgaccgtggcgcacttgccgggatgatgctggtgtcttattg
acttgtgtctcttttatgggagattcttcgcaaattgctgctggcacccattctggagag
ctgaaaatatttgacactaacagcagcagtatcttagaaagcttcaccagtcaccaggca
cctttaacacttctacagtcctacctttccgttgagacacagcttctcttgtcttcaagt
tctcacgatgtgcggttatgggatgcaacttctgtttcagctgggcctaagcattcattt
gaaggctgtaaagctgctcgatttagcaatttcggtacaacgtttgctgcattgtctgcg
gagcaatctcggcgcgagattcttctgtatgacactcaaacctgccaagtggaactgaaa
cttacagacacatccaatattccttcaggccgaggacatatgtattcccttgcacatttt
agcccatcagacaatatgcttctctggaacggtgtcttgtgggatactcgtggttctggc
ccaattcaccgttttgatcaatttactgactatggtggcgggggctttcatcctgctggc
aatgaggtcatcataaattcggaggtatgggatttgcggaacttcaggcttctgcgaagt
gtaccgtctttggaccagactgtaataacatttaatgctagtggtgatgtgatatatgcc
atcttgagaagaaatcttgaggatgtgatgtccgccttccagacacgtcgtgttaaacat
cctctctttgctgctttccgtacggtggatgctgttaactactctgacattgcaaccatt
ccagtcgaccgttgtgtacttgactttgcgacggagccaactgattcatttgttgggctg
gtcacaatggatgaccaagatgagatgtactcttctgctagggtgtatgaaattggtcgg
aggaggccaactgaggatgattcagaccctgatgatgctgaaagtgaagatgaagatgaa
gacgatgatgatgacattgacgaggaagcaatccttggaacggatcttgatggggacggt
gaaagcgatgcagatgatttgagcaatgatgatgatagtgtgagtgagcttgatgacgaa
gaagacgaagacggagacttcattgtagatggtgtggacttcggtggtggaggtatattg
gagattgtgacagatggtgaagatgaagatgacagtgagcttgttgaatcctttagtagt
ggggatgatgatgatgatgatctgttgtaa
DBGET
integrated database retrieval system
