Solanum pennellii: 107028541
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Entry
107028541 CDS
T04130
Name
(RefSeq) eukaryotic initiation factor 4A-2-like
KO
K03257
translation initiation factor 4A
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107028541
03012 Translation factors [BR:
spen03012
]
107028541
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107028541
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107028541
mRNA cycle factors
Stress granule specific factors
107028541
Translation factors [BR:
spen03012
]
Eukaryotic type
Initiation factors
eIF-4
107028541
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107028541
Exosomal proteins of bladder cancer cells
107028541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Methyltr_RsmF_N
Motif
Other DBs
NCBI-GeneID:
107028541
NCBI-ProteinID:
XP_015085128
UniProt:
A0ABM1HGA3
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All DBs
Position
8:56002827..56005751
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AA seq
413 aa
AA seq
DB search
MAGLAPEGSQFDARQFDAKMTELLGTEQQEFFTSYDEVHDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP
DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctggcttggcacctgaaggttctcaatttgatgctcgtcaatttgatgctaaaatg
acagagctgcttgggactgaacagcaggagttctttacatcatatgatgaggttcatgac
agtttcgatgccatgggtttgcaagaaaatcttcttaggggcatctatgcctatggtttt
gagaagccatctgctatccagcaaaggggtattgttcctttctgcaagggtcttgatgtg
atccaacaggcacaatctggtacaggaaagacagcaactttctgctctgggattctccag
cagcttgattacagcttagtcgaatgtcaggctctggttctggctccaacccgtgagctt
gcccaacagattgagaaggttatgcgagcacttggtgactatcttggtgtgaaggttcat
gcctgtgtaggaggtaccagtgtccgtgaggatcagcgtatccttcaaagtggtgttcat
gtggttgttggtactcctggtcgtgtatttgatatgttgcgtaggcagtctcttcgccct
gaccacatcaagatgtttgttctggatgaagctgatgaaatgctctcaagaggtttcaag
gatcagatttatgatattttccaattgctgccaccaaagattcaagttggtgttttctct
gctacaatgccaccagaggctcttgaaattactaggaagttcatgaacaagcctgtgagg
atccttgtgaagcgtgatgagctcactcttgaaggtatcaagcaattttatgtcaatgtt
gacaaggaagagtggaagcttgaaactctttgcgatctttatgagaccttagccatcacc
cagagtgtcatctttgtgaacaccaggcgtaaggttgattggctcactgataagatgcgc
agccgtgatcacacagtatctgccactcatggagacatggaccagaacactagagatatc
attatgcgagagttccgatctggatcatctcgtgtgctcatcactactgatcttctggca
cgtggtattgatgtgcagcaagtatcccttgtgattaactatgacctgcctactcagcca
gaaaactacttgcatcgtattggtcgtagtggacgatttggaaggaagggtgtagctatc
aattttgtcacaaaggatgatgaaaggatgctttttgacattcagaagttttacaatgtt
gtaattgaggagctgccagccaatgtggccgatcttctttga
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