Solanum pennellii: 107028559
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Entry
107028559 CDS
T04130
Name
(RefSeq) GTP-binding protein YPTM2
KO
K07874
Ras-related protein Rab-1A
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107028559
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107028559
04031 GTP-binding proteins [BR:
spen04031
]
107028559
Membrane trafficking [BR:
spen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
107028559
Autophagy
Other autophagy associated proteins
107028559
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107028559
Exosomal proteins of other body fluids (saliva and urine)
107028559
Exosomal proteins of colorectal cancer cells
107028559
GTP-binding proteins [BR:
spen04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
107028559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
SRPRB
Gtr1_RagA
PduV-EutP
FeoB_N
G-alpha
AAA_29
AAA_16
LANC_like
ABC_tran
Septin
AAA_22
AAA_5
Motif
Other DBs
NCBI-GeneID:
107028559
NCBI-ProteinID:
XP_015085151
LinkDB
All DBs
Position
8:66341510..66344830
Genome browser
AA seq
203 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDNVNKLLVG
NKCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASN
NARPPTVQIRGQPVNQKSGCCSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaatacgactatctgttcaagcttttgcttattggagattctggtgttggt
aaatcgtgtcttctcttgagatttgctgatgattcatatcttgagagttacatcagcacc
atcggtgtggacttcaaaatccgcacagttgatcaggatgggaaaaccattaaacttcaa
atttgggatactgctggtcaagaacgttttaggacaattaccagcagttactatcgtggt
gcacatggcataattgtggtttatgatgtaaccgatcaagagagcttcaataatgtcaag
caatggttgagtgaaatagatcgatatgcaagtgataatgtgaacaaacttcttgttgga
aacaagtgcgatctcacagctcagaaggtggtttccacagagactgctcaggcttttgct
gatgagatcggcatccctttcatggaaactagtgcaaaaaatgccaccaacgtagagcag
gctttcatggctatggctgcttcaatcaagaacagaatggcaagccaaccggcatcaaac
aatgcacgacctccaaccgtgcagatccgaggacaacctgtcaaccaaaagagcggttgc
tgctcatcttga
DBGET
integrated database retrieval system
