KEGG   Solanum pennellii: 107028578
Entry
107028578         CDS       T04130                                 
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:spen01009]
    107028578
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spen03036]
    107028578
Enzymes [BR:spen01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     107028578
Protein phosphatases and associated proteins [BR:spen01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107028578
Chromosome and associated proteins [BR:spen03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107028578
SSDB
Motif
Pfam: JmjC PLU-1 PHD JmjN zf-C5HC2 ARID PHDvar_NSD KDM5_C-hel COX5A BT_3657-like_N zf-HC5HC2H Phage_HK97_TLTM PHD_2
Other DBs
NCBI-GeneID: 107028578
NCBI-ProteinID: XP_015085184
LinkDB
Position
8:complement(68671886..68696787)
AA seq 1839 aa
MGRGRPRAVEKGVLGQNTSASPSGLLNIPPGPVYYPTEDEFKDPLEFIYKIRPEAEKYGI
CKIVPPKSWKPPYALDLNTFTFPTKTQAIHQLQARCASCDPKTFELEYNRFLEEHCGKKA
KKRIVFEGEDLDLCKLYNFVKRFGGYDKVVKEKKWGEVFRFVRPAGKISECAKHVLFQLY
LEHLYDYEEYYSKLNKLGHRSCRRGNQSERKRESDSPSSSSKRRRKNSEGDRTETRKAKE
EEEHDQICEQCKSGLHGEVMLLCDRCNKGWHMFCLSPPLEQVPPGNWYCLQCLNSEKDSF
GFAPGRELPLDAFRRIADRAKKRWFGSTSISQVQLEKKFWEIVEGSAGEVEVKYGSDLDT
SIYGSGFPRLTDEKPSSVEPGTWDEYCASPWNLNNLPKLPGSMLRAVHHSIAGVMVPWLY
IGMLFSSFCWHFEDHCFYSMNYHHWGEPKCWYSVPGSEAQAFEKVMRNSLPDLFDAQPDL
LFQLVTMLNPRVLQENGVPVYKVLQEPGDFIITFPRSYHGGFNCGLNCAEAVNFAPADWL
PHGGFGAELYQLYRKAAVLSHEELLCAVARSEFDSNAAPYLKTELVRVYSKEKSWRERLW
KNGIVNSSPMPPRLKPEYVGTEEDPTCIICQQYLYLSAVACSCAPSSFVCLEHWEHLCEC
KPQKRRLLFRHTLAELNDMVLITDKSNHEEAAKKIRGQLLSSNDPSALSKKIKGGCITHM
QLAEEWLIKSSKLFQNPYSSDAYRRAIKEAEQFMWADHEMDPVRDLVKRLIDAQSWAQNV
RDSLSKVKSWMSDHNSVVKVQMEVVDNLLSLNPVPCNEPAHVRLKDFQKEASELTLEIDS
VLSSCSNILVSDLETLYSKTVDCPIYIKGSEELLCKLSSAKAWAERVRKCVSETSARVEA
DILYKLEKENLSLQVQLPEGEMLLDLIRQVECCQSQCCDMLKCSLSVKELESLLNKWDGF
AVNIPELELLRRYHKDAVSWIKRANNILLGISEREDQETVAHELTCIQKDASLLRVEVEE
LPCVDIELKKARCRVKALKALRCRTSMDYIEKLLMEASILQIEKEKLFTDVYEVKEIAVS
LEERAKRVLENKEEISEFEDVIRASEEIFVILPSLDEVKDAVSMAKSWLSRSQPFLSRDS
MTLGSSPSLEIDTLKILVSESKLLKLSLRELLMIQTLLDTCTRWEQDACSVLHDTECLLN
GANTDDEILSRFGKIEKQIQAIESVVEAGQGLGFKFDMVPKLEDASSTLRWCFRALSFAT
AIPTLEEVKTNLEIATHLPIMYTTCSLCISLLDWVNWLNRALEVSIQSTAGRSNLSDAEE
VLRQYQNICVSSPAMISQLQKAIEKHNSWMDQVHSFFVLNFRDRSWDLLLQLKEKGNNDA
FSCSELDMVFSEVHKTDEWKRRCEEVLHPSIRDANLLTALLQTKNALERSINICEKSNQT
NASALCIFCSHDGVNQKLLTCSTCNDSFHLKCIGWSPGDANDSKVFICPYCHFINSGKIS
RNGSDPLNIGRKSFKLHKLVEILSDAEDLCLWIQERAVLHQIGQKALNFKARIEEIVKFV
LAYLDEDLSIIAKKFCVALKAVHIVGAYDSEANSKLELALARTSWKIRAQRLLDGSQKPS
IQVLQRHLKEGLAVGIPSEDYFRQSLIEVKNLGLQWADIAKKVSTDGGALGLDKVFELIT
EGENLPVSCEKELKLLRDRSMLYCICRRPYDQRPMIACDKCDEWYHFDCIKLSSLPKIYI
CPACCCMEGEDFASMSTSGEEKVVGGKHEVPQTPSPRHRESRRKSRKTKWERTDVAADTS
RNSSNIEQLFWKNRKPYRRVARKRSHFESLSPFIFVQNS
NT seq 5520 nt   +upstreamnt  +downstreamnt
atggggagagggagacctagggctgtagagaaaggggtgttagggcaaaatacaagtgca
tccccaagtgggttattgaatataccaccagggccagtatattatccaactgaggatgaa
tttaaggaccctttagagttcatttacaagatcaggccagaggctgagaaatatggtatt
tgtaaaattgttccacccaagagttggaaacccccttatgcattggatttgaacaccttc
acatttccgacgaaaacgcaagctattcatcagttacaggctcggtgtgcgtcttgtgat
ccgaagacgtttgagttggaatacaataggttcttagaggagcattgtgggaagaaggcg
aaaaaacgtatagtgtttgagggagaggaccttgatttgtgcaagttgtataattttgtt
aagcggtttggagggtatgataaagtagtgaaggagaagaagtggggtgaggtttttagg
tttgttcggcctgctgggaagatttcggagtgtgccaagcatgtattatttcaattgtac
ctggaacatttgtatgattatgaagagtactatagtaagttaaataagctgggacataga
agttgcaggagaggaaaccaaagtgagagaaaaagggagtcagactccccatcctcaagt
agtaagagaaggagaaagaacagtgagggtgatcgaactgaaacacgtaaggcgaaggag
gaggaagaacacgatcaaatatgtgagcaatgcaaaagtggattgcatggggaggtgatg
cttctctgtgatcggtgcaacaagggatggcatatgttctgtttatcacctcctctggaa
caagttccaccggggaactggtattgcttgcaatgtttgaattctgaaaaggatagcttt
ggtttcgcacctggtagagagttgccattggatgcatttaggcgcattgctgatcgtgcc
aagaaaagatggtttggttccacatcaatttcacaggtgcaattggagaagaaattctgg
gaaattgtggagggatcagctggggaggttgaagtgaagtatggcagtgacttggatact
tccatctatggtagtggatttccacgtctaactgatgaaaaaccatcatcagtcgaacca
ggtacatgggatgaatattgtgctagcccttggaacctcaataacttacccaagctgcca
ggttcgatgcttcgagctgtacatcatagcattgctggtgttatggtgccttggctgtat
attggaatgctattctcttcattctgctggcattttgaagaccactgcttttactccatg
aattatcatcactggggagagccaaaatgttggtatagcgttcctggaagtgaagcccaa
gcttttgagaaggtaatgcgtaatagccttcccgatctgtttgatgcacaaccagatctg
ttatttcagctagtaaccatgctgaatccacgtgtgttgcaagaaaatggggttcctgtt
tataaagtgttacaggagcctggggactttattattacctttcccagatcatatcatgga
ggctttaactgtggcttaaattgtgccgaggctgttaattttgcccctgccgactggtta
cctcatggtggttttggagcagagctttaccaactttatcgcaaagctgctgttttgtct
catgaagagcttctctgtgcagtagcccggagtgaatttgatagcaatgcagcaccttac
ttaaaaacagaattggtcagggtctattctaaagaaaagtcttggagagagcggctttgg
aaaaatggtatagtcaattcttctcccatgccacctcgtttgaaacctgaatacgtgggc
actgaagaggatcctacttgcatcatatgccagcaatatttgtatctttctgctgtagca
tgcagctgtgcaccttcatcttttgtttgtcttgagcactgggaacatctgtgcgaatgt
aagccacaaaagcgtcgactcctttttcgtcataccctcgctgaattgaatgatatggtg
cttattacggataagagtaatcatgaagaggctgcaaagaaaatcagagggcaacttctg
tcatccaatgatccatctgctttgtcaaaaaagataaaaggtggctgtatcactcacatg
caacttgctgaagaatggctgataaagtccagcaagcttttccagaatccttattcttca
gatgcttatcgtcgtgcaattaaggaagctgaacagtttatgtgggctgatcatgaaatg
gatccagtgagagatttggtgaagaggttaattgatgctcagagttgggctcaaaatgtc
agggactctctctcgaaagtaaaatcttggatgtctgatcacaatagtgtagtgaaggtg
cagatggaagttgttgacaatttgctcagtttaaaccccgtaccctgtaatgaacctgca
catgtcagattgaaggatttccagaaagaagcaagcgagctgactctggagatcgattct
gttctttcatcatgctcaaatattcttgtgtccgatttggaaaccttgtattccaagaca
gtggattgccccatctacatcaaaggaagtgaggaattgttgtgcaaactgtcttcagct
aaggcttgggctgaaagagtaaggaaatgtgtgtctgagacttctgctagagttgaggca
gatattctctacaagctagagaaggagaatttaagccttcaagtgcaacttcctgaaggt
gaaatgctcctagacttaattagacaagttgaatgttgtcaatctcaatgctgtgatatg
ttgaaatgttctctcagtgtcaaggaacttgaatcacttctcaacaaatgggatggtttt
gcggttaacattccagagcttgaacttctgagacgatatcataaagatgctgtgtcttgg
ataaagcgtgctaacaatattctattgggcatcagcgaaagggaggatcaagaaactgta
gctcatgagttaacttgcattcaaaaggatgcatcattacttagggttgaagttgaggag
ctgccttgtgtggatattgagctaaagaaggctcgttgtagggtaaaagctctgaaggca
cttcgttgcagaacgtccatggattatattgagaagctgttgatggaggctagcatattg
cagatcgagaaagagaaattgtttactgatgtttacgaggtcaaagaaattgctgtctct
ttagaggaaagagccaagcgcgtccttgaaaataaggaagaaatatctgaatttgaggat
gttataagggcttcagaggagatatttgtgatacttccttctcttgatgaagtgaaggat
gcggtatcaatggctaagtcttggctatctaggtcacagcccttcctatcacgtgattct
atgactcttggctcaagtccttctcttgaaattgatactttgaagatattggtatcagaa
tctaagcttctgaagctatctctgagagaactactgatgattcagacattgcttgatact
tgcaccaggtgggagcaggatgcctgctctgtgttgcatgatacagagtgtctgttgaat
ggcgcaaatacagatgatgaaatattgagcagatttggtaaaattgaaaagcaaattcaa
gccatagaatcagttgtagaagcaggtcaaggtcttggtttcaagtttgatatggttcca
aaacttgaagatgcttcttctactcttcgttggtgctttagggctctatcttttgctact
gcaattccaacacttgaggaagtcaagacgaatttggagattgcgacccaccttcctatc
atgtatacaacttgcagtttgtgtatctccttacttgattgggtgaattggcttaataga
gctttggaagtctccattcaatctactgctggaagatccaacttaagtgatgctgaagaa
gttctcagacagtatcagaacatttgtgtctcatctcctgcaatgattagtcagcttcag
aaggctattgagaaacacaactcatggatggatcaggtgcattcattttttgtccttaac
tttagggatcgatcatgggatctgttgctgcagcttaaggaaaaagggaataatgatgct
ttcagttgctccgaattggacatggttttctctgaggttcataagacagatgagtggaag
cgccggtgtgaggaggtcttacacccttcaattagagatgctaacctgcttactgctctt
ttacagactaaaaacgcccttgagagatcaattaacatttgtgagaaatctaatcagacc
aatgcaagcgcgttatgtatattctgctcacatgatggtgtgaaccagaagcttttgaca
tgttctacttgcaatgacagcttccacttgaagtgcataggatggtcaccaggagatgcc
aatgattcgaaagttttcatttgtccttattgtcacttcataaacagtggaaaaatatca
agaaatggaagtgatcctctgaatattggtaggaagagtttcaagttgcacaaactcgtt
gagatcctatctgacgctgaagatctatgtttatggatacaggaaagagctgtacttcat
caaattggtcaaaaagctctcaatttcaaagctcgcatagaagagattgtcaagtttgtt
ttagcttatctagatgaagaccttagcattattgcaaaaaaattctgtgttgctctgaag
gctgtacatattgttggtgcatatgattctgaggcaaacagcaaactcgagttggcatta
gcaagaacttcttggaaaatcagagctcagagattgttagatggttcacagaaaccttca
attcaagtgctccaacgacatttgaaagagggactagctgttggcattccttcagaagat
tattttagacaaagcctgattgaagtgaagaaccttgggttgcagtgggctgatatcgcg
aagaaggtttcaacagatggtggcgcacttggattggataaggtttttgagctcatcacg
gagggtgaaaatttacccgtgtcatgtgaaaaggagcttaagttactaagggatcggagt
atgctttattgcatttgtcggagaccttatgatcaaagaccgatgattgcttgtgataaa
tgtgatgaatggtatcattttgattgcatcaagttatcctcactgccaaagatctacatc
tgccctgcatgttgttgcatggaaggagaggattttgcatcaatgtcaacaagcggcgaa
gaaaaggttgtcggtggcaaacatgaggtacctcagacaccttctccgcgacacagagaa
tcaagaaggaaatcaagaaaaacgaaatgggagagaacggatgttgctgctgatacatca
agaaatagtagtaacattgaacagttattctggaaaaataggaaaccttatagacgagta
gcgcgtaaacgatcacattttgagagcttgtctccttttatttttgtgcaaaatagttga

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