Solanum pennellii: 107028709
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Entry
107028709 CDS
T04130
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
spen
Solanum pennellii
Pathway
spen04016
MAPK signaling pathway - plant
spen04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107028709
04075 Plant hormone signal transduction
107028709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107028709
Transcription factors [BR:
spen03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107028709
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
Bap31_Bap29_C
PUMA_CC
bHLH_INO4
bHLH_SAC51
CENP-H
DMPK_coil
Motif
Other DBs
NCBI-GeneID:
107028709
NCBI-ProteinID:
XP_015085364
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All DBs
Position
8:65278116..65280645
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AA seq
689 aa
AA seq
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MTEYSLPTMNLWNNSTSDDNVSMMEAFMSSDLSFWATNTTNSTSAAVVGVNSNLPHTNNN
TPSVFAPSSSTSASTLSAAATVDASKSMPFFNQETLQQRLQALIDGARETWTYAIFWQSS
VVDFSSPSVLGWGDGYYKGEEDKAKRKLSVSSPAYIAEQEHRKKVLRELNSLISGAPPGT
DDAVDEEVTDTEWFFLISMTQSFVNGSGLPGQALYSSSPIWVAGTEKLAASHCERVRQAQ
GFGLQTIVCIPSANGVVELGSTELIVQSSDLMNKVRVLFNFSNDLGSGSWAVQPESDPSA
LWLTDPSSSGMEVRESLNTVQTNSVPSSNSNKQIAYGNENNHPSGNGQSCYNQKNPPQQQ
TQGFFTRELNFSEFGFDGSSNRNGNSSVSCKPESGEILNFGDSTKKSASSANVNLFTGQS
QFGAGEENINNKNKKRSATSRGSNEEGMLSFVSGTILPSSGMKSGGGGGEDSEHSDLEAS
VVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVS
KMDKASLLGDAISYINELKSKLQNTESDKEDLKSQIEDLKKESRRPGPPPPPNQDLKMSS
HTGGKIVDVDIDVKIIGWDAMIRIQCNKKNHPAARLMAALMELDLDVHHASVSVVNDLMI
QQATVKMGSRHYTEEQLRVALTSKIAETH
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatacagcttgcccaccatgaatttgtggaacaatagtactagcgatgataac
gtttctatgatggaagcttttatgtcttctgatctttctttttgggctactaatactact
aattctacttctgctgctgtggttggtgtcaattcaaatcttcctcatactaataataat
actccctctgtttttgctccatcttcttctacatctgcgtctactttatccgcagctgcg
actgtggatgcttccaaatctatgccgtttttcaaccaagaaacccttcagcagcgtctt
caagctcttattgatggtgctagagagacgtggacttatgctatcttttggcaatcgtcg
gttgttgatttctcaagtccgtctgtgttgggttggggagatggttattacaaaggggaa
gaagataaagccaagaggaaattatcggtttcatcacctgcttatattgctgagcaggag
caccggaagaaggttctacgggagctgaattcgttgatttccggggcaccacctggaacg
gatgatgctgttgatgaagaagttaccgacaccgaatggttctttcttatctccatgacg
caatcgtttgtgaatggaagtggtcttcctggtcaggcgttgtatagttccagtccgatt
tgggtcgccggaactgagaaattggcagcttcacactgtgaacgtgttaggcaagcacaa
gggttcgggcttcagactattgtctgtattccttcagctaacggcgtggttgaattgggc
tcgacggagttgattgttcaaagttctgatcttatgaacaaggttagagtattgtttaac
ttcagtaatgatttgggttctggttcatgggctgtgcagccggagagcgacccatcggcg
ctttggctcactgatccatcgtcctcgggcatggaagttagagagtctttaaatacagtt
caaacaaattcagttccatctagtaatagtaataagcaaattgcttatggaaatgagaat
aatcatccatctggaaatggtcagagttgttacaatcagaagaatcctcctcagcaacaa
acccaaggattcttcacgagggagttgaatttttcggaattcggtttcgatggaagtagt
aataggaatggaaattcatcggtttcttgcaagcctgaatcaggagaaatcttgaatttt
ggtgatagtactaaaaaaagtgcttccagtgccaatgtgaacttgtttacaggtcagtcc
caatttggggctggggaggagaatattaacaataagaacaagaaaagatcagctacttcc
aggggaagcaatgaagaaggaatgctttcatttgtttcaggtacaattttgccttcttcg
ggcatgaagtcaggtggaggcggaggcgaagactctgaacattcagatctcgaggcttca
gtggtgaaagaagctgatagtagtagagtggtagaaccggagaagaggccaaggaagcga
ggtagaaagccagcgaatggacgggaggagccattgaatcacgtcgaggcagagaggcaa
aggagggagaaattgaaccaaagattctacgcgcttagagctgttgtaccaaatgtgtct
aagatggacaaggcatcacttcttggagatgctatttcctatataaacgagttgaaatcg
aagcttcaaaatacagagtcagataaagaagacttgaagagccaaatagaagatttaaag
aaagaatcaaggcgccccggtcctcctccaccaccaaatcaagatctcaagatgtctagc
cacactggaggcaagattgtagacgtggatatagacgttaagataatcggatgggatgca
atgattcgtatacaatgtaataaaaagaatcatccagccgcaaggctaatggcagcgctc
atggaattagacctagacgtgcatcatgccagtgtttcagttgtcaacgatttgatgatc
caacaagccacagtgaaaatgggtagcagacattacactgaagagcagcttagggtagcg
ttgacatcgaaaattgctgaaacacactaa
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