Solanum pennellii: 107028898
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Entry
107028898 CDS
T04130
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
spen
Solanum pennellii
Pathway
spen00270
Cysteine and methionine metabolism
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
107028898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107028898
03032 DNA replication proteins [BR:
spen03032
]
107028898
03036 Chromosome and associated proteins [BR:
spen03036
]
107028898
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
spen02048
]
107028898
Enzymes [BR:
spen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
107028898
Transcription factors [BR:
spen03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107028898
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
107028898
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107028898
Prokaryotic defense system [BR:
spen02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
107028898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
107028898
NCBI-ProteinID:
XP_015085626
LinkDB
All DBs
Position
8:368893..381065
Genome browser
AA seq
1075 aa
AA seq
DB search
MAKKQNDSSRFSTNLTPSPRKDKPISSSSALALFYPQNEEPVPLIVFYPSSVRRRSSRFT
TNKFSTSATEFMKKNRDTISPEKTVFLLPSPPTLAGKNTPAEGTRRSPRLVSLSARTTTA
KDKGKKVNSRKSEGEIKQVELSRKRKPVSSKMDEETRKSPRFNSDSSNGVQLALPEMSAC
GALAAGGRTGTKRELLALMMTAPANRSASSKRAARGSDSVNVGNNSRGSRRKDPVFAESP
GTSVKITAESNSVGEKNLRSRKTQGSVNYNESKGSEIKRIKSSAEKSVRKQKSNACFIGE
PIDTEEAQQQWQWRYELKNRKTQRQGWKLNSGEEDEIILNVECHYAQAKVAGFIFNIGDC
AFVKGEGKKKHIGRILEFFKTTEGEDYFRVQWFFRAEDTVLQGAASFHDPKRVFYSTLEN
DNLLDCIVSKVNVVELPTRHDLNKKDVPPAHFYYDMEYCVDYSTFRTLHNVKSSVSPSLV
DASYKPITTYPLEVSPSCEPMKVELSLLDLYAGCGGMSMGLCLGTKLSGLNLVTKWAVDF
NKAACDSLKLNHPQTHVRNEGVENFLELLKRWEKLIKSYGCSDIKTSSNSELDDRDEGEN
NDDSLSGSNASSGEYEVLRFVDICYGDPNNDGKSGLHFKVRWKGYGPSEDTWEPIENLKN
CGDSIKDFVRRGQQLKILPLPGDVDMICGGPPCQGISGYNRHRNTDDPLSDEKNRQIIIF
MDVVEFLRPKYVLMENVADILRFDKASLGRYALSRLVHMRYQARLGTMAAGCYGLPQFRL
RVFFWGALPSERLPPFPLPSHDVIVKYWPSPEFERNTVAYEEGQPRDLEEALVLRDAISD
MPAVTWHETREERPYEMPPETEFQKYIRLSKHEIMSCSSTGVKETKEPVLSDHRPCQLNE
DDYLRVCLVPHRKGANFRDLPGVIVGGDNVARRDTKDPKVLPNGKPMVPDCAFNFEHGKS
KRPFARLWWDETVATLVTFPNHRAQAILHPEQDRVLTIREYARLQGFPDFYRFTGTLKER
YCQVGNAVAVPVGRALGYALGLAYQRLAGNEPLIKLPSNFSFLTPPIDDIVVLQT
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagcaaaatgattcttcaagattttctacaaatctaactccatctccccga
aaagacaaacccatttcatcttcatcagcattagctctgttttaccctcaaaatgaagaa
ccagttccattgatagtgttttatccatcatcagttaggagaagatcttctagattcact
accaacaaattcagtactagtgctactgaattcatgaagaaaaatcgggacaccatttca
cctgaaaaaactgtttttcttcttccttcaccacctacattggccggaaaaaatactccg
gcggaaggtacgaggaggtcgccgagattggtatcactgtcagctaggacgacgacggcg
aaggataagggcaaaaaagtaaattcaaggaaatcagagggtgaaataaaacaagtggaa
ctatcgaggaagcggaaaccggtaagttcaaaaatggatgaagaaacccgaaaatctccg
aggttcaattccgattcctcaaatggagttcaactagcattgccggagatgagcgcgtgc
ggtgcactcgccgccggcggaagaaccggcacgaagagggaactgctggctctgatgatg
acggcgccggcgaacagaagcgcgtcgagtaaacgcgctgccagggggagtgattcagta
aatgtagggaacaattcacgaggatcccggaggaaagatccagtttttgcagaatcgccg
ggaacatcggtaaaaataacggctgagagcaattcagtgggagagaagaatttaagatca
agaaaaacacaagggagtgttaattataatgagagtaaaggatcggaaataaaacggata
aaaagttcagcagagaaaagtgtgaggaagcagaagagtaatgcatgttttatcggtgaa
ccgatagatacagaggaagctcaacagcaatggcaatggcgatacgaattgaagaatcga
aaaacgcagcgccaagggtggaaattaaattccggcgaagaagatgaaatcatattaaat
gtggaatgccattatgctcaagctaaggttgctggtttcattttcaatattggagattgt
gcatttgtaaagggtgaaggcaagaaaaaacatattggcaggatcttggagtttttcaag
acgacagagggggaagattattttagggtacaatggttcttcagagctgaagatacggtg
ttgcaaggtgcggcttctttccatgacccaaagcgcgtattctattctactttggagaat
gataatttactagactgcatagtttccaaagttaacgtggtagaattaccaaccaggcat
gatttgaataaaaaggatgttccacctgctcacttttattacgacatggaatactgtgtt
gattattccacattccgtacgttgcataatgtcaaaagctctgtttccccttcgctagtt
gatgcgtcatataagcctatcactacatatcctctggaggtatcaccaagttgtgaacct
atgaaagtggagttgtcattattggatctatatgctggttgtggcggcatgtcaatggga
ttgtgccttggcacaaaactctctggtcttaatcttgtgacgaaatgggcagttgatttt
aataaagctgcctgtgatagcctgaaactaaatcatcctcagacacatgttaggaatgaa
ggtgttgagaattttctggagctactgaaaagatgggagaagctaattaagtcgtacggc
tgtagtgatatcaaaacaagctctaatagtgagctagacgacagagatgaaggtgaaaac
aatgatgattctctgtctggttccaatgcatcttctggagaatatgaggtattaagattc
gttgacatatgttacggggatcccaacaacgatggaaaatctggacttcattttaaggtg
cgatggaaaggttatggtccgagtgaagatacttgggagccaattgagaacttgaaaaat
tgcggagacagtataaaagattttgttcgaagggggcaacagttgaaaattctgcctcta
ccaggtgacgttgatatgatatgtgggggtcctccttgccagggcatcagtggatataat
cgccacagaaatactgatgacccattgtctgatgaaaaaaatcgtcaaattattatattt
atggatgttgtggaattcctacggcctaaatatgtgttgatggaaaatgttgctgacata
ttgaggttcgataaagcatctcttggaagatatgctttaagccgtttggtacatatgaga
taccaagcaagacttggaactatggcagctggttgttatggtcttccacaattccgattg
cgagttttcttttggggtgcacttccgagtgagaggttgcccccatttccacttccttca
catgacgtgattgttaaatattggccctcacctgaatttgagcgtaatactgttgcttat
gaggaaggacaaccacgtgaccttgaggaagctcttgttcttcgtgatgcgatatctgat
atgccagctgtcacatggcatgaaactcgtgaagaaaggccatatgagatgccccccgaa
acagagttccagaaatacataagattatctaaacatgagataatgagttgttcatcaact
ggagtcaaggaaacaaaagaacctgttttgtctgatcatcggccttgccaactaaacgag
gacgattacttgcgagtttgtctagtcccacatagaaagggagcaaatttcagggacctc
cctggtgtaattgtaggaggggataatgtggctcgtcgtgatactaaagatccaaaggtt
ctaccaaacgggaagcccatggttcctgactgtgccttcaactttgagcatggaaagtct
aagaggccatttgcaaggttgtggtgggatgaaacagtagcaacattagtgacgtttcct
aatcatcgtgcccaggctatcttacacccagagcaagatcgagtactgaccatacgagag
tatgcaagattgcaaggttttccagatttctataggtttactggtactctcaaggaaaga
tattgccaagttgggaatgctgtagcagttcctgttggtcgcgcacttgggtatgcgctt
ggacttgcctatcagaggctagctggaaatgagcctcttattaaattgccatcaaatttc
tcattcttaacacctccaattgatgacattgttgtcttgcaaacataa
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