Solanum pennellii: 107028912
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Entry
107028912 CDS
T04130
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107028912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107028912
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107028912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
PD40
WD40_MABP1-WDR62_1st
eIF2A
DPPIV_N
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
107028912
NCBI-ProteinID:
XP_015085642
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Position
8:complement(28067177..28071096)
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AA seq
440 aa
AA seq
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MPSIPQPGEVTICEINRDLITADELSDDAAKETYGKVLGIIFSPVPFQSENLLSTLSSEQ
GADQRKSGLLWAALQAVSTGLLRHFFHPIDVKLLQDVDFHVLDWHQHKHILAFISGQHQV
RIRDYEDSEGGSPCVLINDSQKDVRSLSWRPNGGRALAVACKGGICIWAASFPGNTASVR
SGVTLGTLSRGSGTKWTLVDFLLSPEQEQITALSWSPNGKYLASASFESSSFIIWDVAQG
VGTPIRRGLGGISLLRWSPSGDYFFSAKFDGTFYLWETNTWTSEPWSSTNGFVMGAAWDP
DGSRILIAFSESSTLGSIHFATRPPSLDAHLIPVELSDIQSLTGSRGIDKIAWDASGERL
ALSYRDGNDLYRGLIAIYDVRRSPLISASLVGFIRGPGNDTKPIAFSFHDKFKQGPLLSV
CWSSGYCCTYPLIFRSNVLP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaattcctcaaccaggtgaagttaccatctgtgaaatcaatcgagacctcatt
actgcagatgaactctctgatgatgcagctaaggaaacctatggcaaggttcttggaatt
atattcagtccagttccttttcaatcagaaaatttgttgagtacactgagctctgaacaa
ggtgccgatcagaggaagagtggcctactttgggcagcattgcaggcagtttctactggt
ttgctgaggcacttttttcaccccattgatgtaaaattgttacaagatgttgatttccat
gttcttgattggcaccagcacaagcatatattagcctttatttccggacaacatcaggtg
agaatacgtgattatgaagattctgagggagggagtccttgcgttttgatcaatgactcc
caaaaagatgttagaagtctttcatggcggccaaatggtgggagggcacttgctgtggcc
tgcaagggtggcatttgcatttgggctgcttcatttccaggcaatacagcttcagtgaga
tcaggtgtcacattgggtactctttctagaggctcaggaactaaatggacccttgtagac
ttccttctaagtcctgaacaagaacaaattactgccctttcctggagcccaaacgggaag
tatttggcatcagcttcatttgagagctcttcattcatcatttgggatgttgctcaagga
gtgggaacacctattcgacgtggcttagggggcatctccttattgagatggtccccatca
ggagattatttcttctctgcaaaatttgatgggacattctatctctgggagactaataca
tggacatcagaaccatggtcctcaactaatggttttgtcatgggagcagcttgggatcct
gatggtagtagaatactcattgctttctctgaatcttcaaccttgggttccattcacttt
gcaaccaggccaccgtctctagatgcacatcttatacctgttgagttgtcagatatacag
tccttgacaggaagtcgaggaatagataagatagcatgggatgcttcaggagagcgtcta
gccttgtcttatagagatgggaatgacttgtacagaggtcttatagcaatatacgatgtt
agaagaagtccactgatttcagcatctttggttgggttcattaggggtcctggaaatgac
accaagccaatagccttttcatttcatgacaagtttaagcagggaccattgctttctgtg
tgttggagcagtggatattgctgcacctatcccctcatatttcgctcaaatgttcttcca
taa
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