Solanum pennellii: 107028914
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Entry
107028914 CDS
T04130
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107028914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107028914
03036 Chromosome and associated proteins [BR:
spen03036
]
107028914
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107028914
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107028914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
107028914
NCBI-ProteinID:
XP_015085643
LinkDB
All DBs
Position
8:complement(59387677..59406720)
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AA seq
719 aa
AA seq
DB search
MPGLTSESDDLAMVPVSLETENQPVVNYPLRHGLKSPVHRLSFSWACGNTLRVSVFRKPQ
SEKADGDGEAGGRVVEVKLSNSGDEEVDAARWRRMAYSSVTPFALLQSRKHSLSAASRMS
LDIPPYKAEWWEHVIEYSKEISSLLSDRKPPPKSIIEDAKSVVNEIAAPMCLKAAWELLE
IFYIDKQSQSWIPERLLDWLADYNSLFSGTLPTIHSKLVDFQQELVGVQVVEDNPNYWDA
MSSALAVGWLETVVKLLRLHGSYRFDQLSSRETENGLVEAVAVLISKMPRMRPSLREDNL
GECYKTKPDFMKAWEKWRTQISKLDCSSYWLQCDHRQTREGLKNLIQIMLGNPTVLSNAT
FNWMELFISHFLYVRPFTAGLESMHNSAQKCMQVKPASIPHKLFGLVLGILGENTEVVLA
ECSRSFGPWMMVHAVELLTAGSTHAEILLHEEHSKLGGVSIEELHRLVYAQVLSSHALTW
QIAPIYLTSCIKQGIRLLENLLYKQPVQHSQILLKSIEICRLYELDSINSNIMRIAGVHH
WKHGRKGSGVFWLQQARDEFRLNRIAKQLFDFVGKSVSDEGFKQWEGLIELLGSESRTAG
GLEFLNKYRDFRRSLLQVHGDTPTDAARNAAEALVSLMKNPSTPQRFWLPLLYDSLKLLM
WQERPLVNVSQTQLLLNKLQELSMARLRPDFVEADLPSDALSSVRLALATNLGRAILEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccagggctgacgtcagaatccgatgaccttgcaatggttccagtctcgctggagacg
gaaaatcaacccgtggtcaactaccctctccgtcatggtctcaaatccccagttcatcga
ctctccttttcgtgggcgtgtggcaatactctccgagtatcagttttccggaagcctcag
tcggagaaggcggacggagacggcgaggctggcggaagagtggtggaagtgaagcttagt
aacagtggagatgaggaagttgatgctgcaagatggaggagaatggcctacagttcagtg
actcctttcgctcttcttcagagccggaaacattctttgtctgcagcatcgagaatgtcg
ttggatatccctccttacaaggcagagtggtgggagcatgtcatagagtacagcaaagag
ataagttctcttctcagtgatcgaaaaccgcctcctaaatcaattatcgaagatgccaag
tcggtagtaaatgaaattgcagcgccaatgtgtcttaaagctgcgtgggagctattggag
atattttacatagacaaacaatctcaatcttggattcctgaacggttgctagattggtta
gctgactacaattccttattctcgggaactctaccaactattcactcgaagcttgtggat
tttcagcaggaacttgttggagtacaggttgttgaagataatcctaactactgggatgca
atgtcatcagcattggctgttggctggctggaaactgtggtaaaattgctgcgcttgcat
ggctcttaccggtttgatcaattatctagtcgagagacagagaatggactggttgaagca
gttgctgttcttatatccaagatgcctagaatgcgtcctagtctgagagaagacaatttg
ggcgagtgttacaaaaccaagcctgatttcatgaaggcatgggagaagtggagaacacaa
ataagtaaactggactgcagttcctactggcttcaatgtgatcaccggcagaccagagaa
gggctgaaaaatttgatccagatcatgttgggaaatccgactgttctatcaaatgcaact
ttcaactggatggagctttttatatcccatttcttatatgttaggccatttactgcgggt
ctagagagcatgcataattcagctcagaagtgcatgcaagtaaagccagcttccatcccc
cataagttgtttggtcttgtacttggaattcttggagaaaatactgaggttgttctagca
gagtgttcaagatcatttggaccttggatgatggtgcatgctgtagagttgttgacagct
gggagcactcatgcagaaattcttttgcatgaagagcattccaaacttggaggagttagc
atagaagagctgcatagacttgtatatgcacaagttctgtcttctcatgcattaacgtgg
caaattgcgccaatatacttgacttcatgcataaaacaagggattagattattggagaat
ttgctgtacaagcagcctgtacagcatagccaaattctgttaaagagtatagagatctgc
cgcctgtatgaacttgactctataaattcgaacattatgaggattgctggtgtgcatcac
tggaaacatgggagaaaaggctctggtgtcttctggctacagcaagctcgagatgaattt
cgtttaaacagaattgccaagcaattatttgatttcgtggggaagtctgtatctgatgaa
ggattcaagcaatgggagggtctcatagagttgctgggttctgagtctagaactgctggt
ggacttgagtttctgaacaagtacagggactttaggagatccctattgcaggttcacggt
gatacgcccactgatgcagctcgtaatgcagctgaagctctcgtctctctcatgaaaaat
ccttccacaccgcaacgcttttggttacctcttctatatgattcattgaaattgttaatg
tggcaggagcgaccgttggttaatgtttctcaaactcagcttctgttgaataaactgcaa
gaattgtccatggcaagattgcggccagactttgttgaagctgacttgccatctgatgcc
ttaagctctgtcaggctggcacttgccactaacctaggtcgtgcaatcctcgaagagtga
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