Solanum pennellii: 107028933
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Entry
107028933 CDS
T04130
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107028933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107028933
Spliceosome [BR:
spen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107028933
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
107028933
NCBI-ProteinID:
XP_015085668
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Position
8:complement(66679218..66683459)
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AA seq
483 aa
AA seq
DB search
MATLADSFLADLDELSDNEADVIDEENLDVDQMEEDGDLADIEALNYDDLDNVSKLQKSR
RYVDIMQKVEDALEKESDVTNKGVVLEDEPEYQLIVDCNALSVDIENEIVIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLP
EDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSS
LAKMPACNVQLLGAKRKNLAGFSTATSQFHVGYIEQTELFQSTPPSLRMRACRLLAAKST
LAARVDSINGDPVGKTGRSLREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSDTGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcctggcagatctggacgagttgtccgataatgaagct
gatgttattgatgaggagaatcttgatgttgatcagatggaggaagatggagacttggca
gacattgaagcacttaattatgatgatctagacaatgtctccaagctgcaaaaatcacgt
cgctatgttgacataatgcagaaagttgaagatgcacttgagaaggagtctgatgtcacg
aataaaggtgttgttcttgaagatgaaccagagtatcagttgattgtagactgtaatgct
ttatcagttgacattgagaatgaaatcgttataatccacaacttcatacgtgacaagtat
cgattgaaatttcctgagttagagtcacttgttcatcacccgattgattatgcccgggtt
gttaaaaaaattggaaatgaaatagatctgactcttgttgacttggaaggactcctaccc
tcagctattatcatggttgtgtctgttacggcatcaactacgagtggcaagccattgcca
gaagatgtgttacagaagacggtggaagcatgtgatagagcccttgctcttgattcagca
aagaaaaaggttctcgattttgttgagagtcgaatggggtatattgctcctaatctttct
gctgtagttgggagtgcagttgctgcaaaacttatgggtactgctggtggtctctcatcg
ttggcgaaaatgcctgcttgtaatgtccagcttcttggtgccaaaaggaagaatttagca
gggttctccacagcaacatcccaatttcatgtgggttatattgagcaaacagaattattt
cagagtacacctccttccttaaggatgcgagcctgtagactgctggcagcaaaatctact
ttagctgcacgtgttgactcgatcaatggagacccggttggtaaaactggaagatctctt
agggaagagatacgtaaaaagatagagaagtggcaagagccacctcctgcaaagcagcca
aagcctcttccagtccctgattccgagcctaagaaaaagagaggtgggcgtcgtctgaga
aagatgaaagaaagatatgctatcacggacatgcggaaactagcaaataggatgcagttc
ggaatacctgaagaaagctccttaggtgatggactaggagagggctatggcatgcttggt
caagctggaagtggtaaactgcgtgtgtcagttggtcagagcaagcttgctgccaaagta
gctaagaaattcaaggagaagagttatggaagcagtggtgctacatcaggcttgacttca
agtttggcctttactcctgtgcaaggtatcgagctatcaaatcctcaggcacttgcaaat
cagcttggcagtggaactcagagcacctatttttcggatactggaacgttttccaagatt
aagagaacatga
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