Solanum pennellii: 107029209
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Entry
107029209 CDS
T04130
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107029209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107029209
03032 DNA replication proteins [BR:
spen03032
]
107029209
Spliceosome [BR:
spen03041
]
Complex A
U1 snRNP components
Sm proteins
107029209
U2 snRNP components
107029209
Complex B
U1 snRNP components
107029209
U4/U6.U5 tri-snRNP components
107029209
Complex C
U2 snRNP components
107029209
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107029209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
107029209
NCBI-ProteinID:
XP_015086058
LinkDB
All DBs
Position
9:complement(78390110..78394264)
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AA seq
109 aa
AA seq
DB search
MSRPMEEDAPQGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM
VLENVREMWTEVPKTGKGKKKAVAVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaccaatggaagaggatgcccctcaagggaaaaatgaggaagaggagttcaat
actggcccactttctgtcctgatgatgagtgttaagaataacacacaggttctcatcaac
tgtaggaacaacaggaaacttcttggtcgtgtgagagcatttgatcgtcactgcaatatg
gtgcttgaaaatgttagagaaatgtggactgaggtgcccaagactggaaaaggaaaaaag
aaagctgttgctgttaacaaagataggtttatcagcaagatgttccttcggggagattct
gtgatcattgtcctccgaaatcctaagtag
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