Solanum pennellii: 107029274
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Entry
107029274 CDS
T04130
Name
(RefSeq) uncharacterized RING finger protein C548.05c-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107029274
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107029274
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107029274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_10
Prok-RING_4
zf-rbx1
Zn_ribbon_6
zf-ANAPC11
zf-RING_4
zf-Nse
Rtf2
TRAF3_RING
zf-RING_6
Sina_RING
Zn_ribbon_LapB
Motif
Other DBs
NCBI-GeneID:
107029274
NCBI-ProteinID:
XP_015086142
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All DBs
Position
9:63162171..63168425
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AA seq
225 aa
AA seq
DB search
MSTQDRRAFPMRYTRNQSRRKTVLDVDLNVPPPSDNRDHEGTSSRVVPGDVPPAQRGASS
TPAPIDVEALDDDVMIISSPRALAEANNSNMRTRGQVILVDEDSEDHLPMFNRRNMRRRV
STNQSTIMGDIYINLEANSSLQAVTAQRAIPPKPIQPPTPPKPIQPTFSCPVCMGTLVEE
MSTKCGHIFCKACIKASIAAQGKCPTCRRKITMKDTIRVYLPAAS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaagacaggagggcttttccgatgaggtatacaaggaatcaatcaagaagg
aagacggtactggatgtagatctcaatgtgccacccccatctgataatagggatcacgaa
ggaacttcaagtcgtgttgttcctggggatgtgccacctgcacaaagaggtgcttcttca
acacctgccccaattgatgttgaggctcttgatgatgatgtgatgataatttcttcccct
agggcacttgcagaagcaaacaacagcaacatgaggactcgtggacaggttattcttgtt
gatgaggattctgaggatcatctgccgatgtttaacaggcgcaacatgcgcagaagagtc
tcaaccaatcagtcaacaataatgggtgacatctacataaacctagaagcaaatagcagc
ttacaggcagtcactgcacagagggcaataccaccaaagccaattcaacctccaacaccg
ccaaagccaattcaacccacatttagctgtccagtatgcatgggaaccttagttgaggag
atgtcaacaaaatgtggtcacattttctgcaaagcttgcatcaaggcttccatagctgct
cagggtaaatgtcctacctgtaggaggaaaattaccatgaaagacaccataagggtgtat
cttcctgccgcaagttga
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