KEGG   Solanum pennellii: 107029274
Entry
107029274         CDS       T04130                                 
Name
(RefSeq) uncharacterized RING finger protein C548.05c-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spen04121]
    107029274
Enzymes [BR:spen01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107029274
Ubiquitin system [BR:spen04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107029274
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-RING_10 Prok-RING_4 zf-rbx1 Zn_ribbon_6 zf-ANAPC11 zf-RING_4 zf-Nse Rtf2 TRAF3_RING zf-RING_6 Sina_RING Zn_ribbon_LapB
Other DBs
NCBI-GeneID: 107029274
NCBI-ProteinID: XP_015086142
LinkDB
Position
9:63162171..63168425
AA seq 225 aa
MSTQDRRAFPMRYTRNQSRRKTVLDVDLNVPPPSDNRDHEGTSSRVVPGDVPPAQRGASS
TPAPIDVEALDDDVMIISSPRALAEANNSNMRTRGQVILVDEDSEDHLPMFNRRNMRRRV
STNQSTIMGDIYINLEANSSLQAVTAQRAIPPKPIQPPTPPKPIQPTFSCPVCMGTLVEE
MSTKCGHIFCKACIKASIAAQGKCPTCRRKITMKDTIRVYLPAAS
NT seq 678 nt   +upstreamnt  +downstreamnt
atgagcactcaagacaggagggcttttccgatgaggtatacaaggaatcaatcaagaagg
aagacggtactggatgtagatctcaatgtgccacccccatctgataatagggatcacgaa
ggaacttcaagtcgtgttgttcctggggatgtgccacctgcacaaagaggtgcttcttca
acacctgccccaattgatgttgaggctcttgatgatgatgtgatgataatttcttcccct
agggcacttgcagaagcaaacaacagcaacatgaggactcgtggacaggttattcttgtt
gatgaggattctgaggatcatctgccgatgtttaacaggcgcaacatgcgcagaagagtc
tcaaccaatcagtcaacaataatgggtgacatctacataaacctagaagcaaatagcagc
ttacaggcagtcactgcacagagggcaataccaccaaagccaattcaacctccaacaccg
ccaaagccaattcaacccacatttagctgtccagtatgcatgggaaccttagttgaggag
atgtcaacaaaatgtggtcacattttctgcaaagcttgcatcaaggcttccatagctgct
cagggtaaatgtcctacctgtaggaggaaaattaccatgaaagacaccataagggtgtat
cttcctgccgcaagttga

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