Solanum pennellii: 107029323
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Entry
107029323 CDS
T04130
Name
(RefSeq) LOW QUALITY PROTEIN: double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
spen
Solanum pennellii
Pathway
spen03440
Homologous recombination
spen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107029323
03450 Non-homologous end-joining
107029323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107029323
03400 DNA repair and recombination proteins [BR:
spen03400
]
107029323
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
107029323
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
107029323
BRCA1-C complex
107029323
NHEJ (non-homologous end-joining)
MRX complex
107029323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
SPG48
Motif
Other DBs
NCBI-GeneID:
107029323
NCBI-ProteinID:
XP_015086200
UniProt:
A0ABM1HJ07
LinkDB
All DBs
Position
9:complement(2840904..2853838)
Genome browser
AA seq
691 aa
AA seq
DB search
MDDTSRDEGSNTIRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEKKQVDFVLLGGD
LFHENKPSRATLVKAIEILRRYCLNDQPVQFQVVSDQTVNFANLFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGQIALHPILIRKGLTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVSDWFNILVLHQNRVKANPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIEGESKQKHVLLLEIKGN
QYRPTKIPLNSVRPFEYTEVVLKDEPDIDPNDHSSILEHLDKVVKKLIERSSQKANNGSV
VKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSNKFGKEAKFDDSERLR
PEELNQQNIEALVAESNLKMEVLPVSDLDVALHNFVNKDEKLAFYSCVQYNLEETRSKIA
RDSDPVKFEEDDIILKVGECLEERVKQRTERNKDDQPFSFSGQSLEDIRGKSTGVGSAVS
FSDDEDASMPSASKSTAGKGRKESSQSFRSSREASEVARGRGRGRGRGRASNSLKQTTLD
ASLGFRQSQRSASDDDKTVQAKGRKRAAPRGRSRGSATAAKRGRKPDSSSSSLQRMLMDV
NEDDDDDDDDITKKENKPRPRATRNYGALRR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggacgatacttcaagggatgaggggagcaacaccattaggatcctagtcgctacggac
tgtcacttgggctatatggagaaggatgaagtacgtaggcatgattcttttcaggcattt
gaagagatatgttcaatcgcggagaaaaaacaggtggactttgtgcttctcggtggtgat
ctgtttcatgagaataagccatccagggcaactctggtgaaagccattgagattcttcgc
cgctattgtctcaatgatcaaccggtgcaattccaagttgttagtgaccagacagtgaac
tttgctaacctatttggtcatgtaaattatgaagatcctcactttaatgtggggttgcct
gttttcagcattcatggcaatcacgatgatccagctggtgtggacaacctatctgcagtt
gacatcctttcggcatgcaatcttgtcaactattttggtaaaatggatctcggtggttct
ggtgttggacagatcgctctgcaccctattcttatccggaagggtttaacatcagttgct
ctttatggtcttgggaatatcagagatgaacggttgaacagaatgtttcaaacaccacat
gctgtgcaatggatgcgacctgaggctcaggaagggtgtcaagtgtcagactggttcaac
attttggtacttcaccaaaatagagtaaaggcaaatccaaaaaatgcaataaatgagcat
ttcctgcctcggtttctggattttattgtgtggggtcacgaacatgaatgcttagtggat
cctcaggaggttccaggtatggggtttcacattactcagccaggttcatctgttgcgaca
tcactgattgagggtgaatcaaaacaaaaacatgtacttctattagaaattaagggaaat
caatatcgtccaacaaagatacctctgaactcagtgcgtccttttgaatatactgaggtt
gtgctgaaggatgaacctgatattgatcctaatgatcacagttcgattcttgaacatttg
gataaagtagtcaaaaagttgatagaaagatctagtcaaaaggctaataatggatctgtt
gtaaagctccctttagttcgagtaaaggtagactactctgggtttatgactataaatcct
caaaggtttggacaaaaatatgtggggaaggttgccaatccacaggatattctcatattc
tcaaaatcttcaaataagtttggcaaggaagctaaatttgatgattctgagcggcttcgc
cctgaagaattgaatcagcaaaacattgaagctttagttgctgagagcaatttgaaaatg
gaggtacttccagtcagcgatctggacgttgccctgcacaattttgttaacaaggatgag
aaattggctttttattcttgtgtacaatacaaccttgaggaaactcgaagcaaaatagct
cgtgattcagatcctgtgaaattcgaagaagatgatataattttaaaagttggagagtgc
ttagaggaacgtgtcaaacaaagaactgaaagaaataaagatgatcaacctttctccttt
agtggacagtctttggaggatattagaggcaaaagtactggagtaggatctgcagtttca
ttcagtgatgatgaggatgcctctatgccctccgcctcaaagtctactgctggaaaagga
aggaaagagtcatctcaatcttttagatcctctcgtgaagcttctgaagttgcaagggga
aggggtaggggtagaggcagaggaagggcttccaatagcttgaagcagacaacccttgat
gcatctctgggattccgtcagtcacagagatctgcatcagatgatgataagacggttcag
gccaaaggacgcaaaagggctgctccaaggggaaggagtagaggttcagcaacagcggct
aaaaggggaagaaaaccagatagctcctcgtcttcacttcaaaggatgctcatggatgtt
aatgaagatgacgatgatgatgatgatgacataacaaagaaagagaataaacctcgacct
cgggcaactaggaattatggtgctttaaggaggtga
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