Solanum pennellii: 107029506
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Entry
107029506 CDS
T04130
Name
(RefSeq) zinc finger protein JACKDAW-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107029506
Transcription factors [BR:
spen03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107029506
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
107029506
NCBI-ProteinID:
XP_015086419
UniProt:
A0ABM1HJL1
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Position
9:1181043..1183545
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AA seq
458 aa
AA seq
DB search
MMSGDLFSIHQQQHQQVLVEQNPNPKANSSSKKRRNLPGTPDPDAEVIAISPKTLMATNR
FICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKQEIVKKKVYICPEKSCVHHDPSRALG
DLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFI
THRAFCDALAEESARITTTNNLNFNQQQQQQPVGVSQIGTSFAQDFTSMTTVNPLHQHQQ
KPRLSLWLNQANNNMSSQSSNLFGLPDHHMVQIPSHNMFATNQILNPTPTTNTNTNTNTN
TPATPNPPIPMSATALLQKAAQMGSTKSTPNYFSNTFGVMHSSSSPSSNNTTQIFNNNEI
HQAFAKQTEDYNQTENILINGCPNMNSSVNSKAINLDQALLQTGGMHNQNVHFNLHNSLT
RDFLGMGNEGGQPFLPQELAKFASINSAMGLSHYSTGH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggagatttgttttcaattcatcaacaacaacatcagcaagtactagttgaa
caaaaccctaaccctaaagctaattcttcttctaagaaaagaagaaatcttccaggtaca
ccagatccagatgctgaagttattgcaatatcaccaaaaacactgatggctacaaacaga
ttcatatgtgaaatctgcaacaaaggttttcagagggatcaaaacttgcaacttcataga
agaggacataatcttccatggaagttaaagcaaaggaacaaacaagaaatagttaagaag
aaagtttacatatgtccagaaaagagttgtgtacatcatgatccatcaagagcacttggt
gatcttactggtataaagaaacattttagcagaaaacatggtgagaaaaaatggaaatgt
gaaaagtgttcaaagaaatatgcagttcaatctgattggaaagctcatactaagacttgt
ggtactagagagtataaatgtgactgtggaacactcttttccaggaaagatagtttcatt
acccatagagctttctgtgatgctttagctgaagagagtgcaagaatcactactaccaac
aatttgaacttcaaccagcaacaacaacaacaacctgttggagtttcacaaattgggaca
agttttgctcaagattttacaagtatgacaactgtgaatccactacatcagcatcagcaa
aaaccaagattatcactttggctaaatcaagctaataacaacatgtcatcacaaagttca
aatctttttggcttaccagatcatcatatggtccaaatcccatctcataacatgtttgct
actaaccaaatactcaaccccacccccaccaccaacaccaacaccaacactaacactaac
acccctgcaaccccaaaccccccaataccaatgtcagcaacagctcttctacaaaaagca
gcacaaatggggtcaacaaaaagcactccaaactacttttccaacacatttggagtaatg
cactcatcatcttctccttcatcaaacaacacaacacaaatcttcaacaacaatgaaatt
catcaagcttttgcaaaacaaacagaggattacaatcaaacagagaatatactcatcaat
gggtgtccaaatatgaattcatctgttaattctaaagcaatcaatttggatcaggcatta
ttacaaacaggtggcatgcataatcaaaatgttcatttcaacttgcataatagtcttact
agagattttttaggcatgggaaatgaagggggtcagccatttttgccacaagaattagca
aagtttgcttcaatcaattcagctatggggttaagccattacagtactggtcactag
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