Solanum pennellii: 107030398
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Entry
107030398 CDS
T04130
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
spen
Solanum pennellii
Pathway
spen03250
Viral life cycle - HIV-1
spen03272
Virion - Hepatitis viruses
spen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107030398
03272 Virion - Hepatitis viruses
107030398
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107030398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107030398
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107030398
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
107030398
Exosome [BR:
spen04147
]
Exosomal proteins
Proteins found in most exosomes
107030398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
NDC80_loop
ATG16
TBK1_CCD1
UQ_con
Lipoprotein_6
RWD
Motif
Other DBs
NCBI-GeneID:
107030398
NCBI-ProteinID:
XP_015087170
UniProt:
A0ABM1HL95
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All DBs
Position
9:75388525..75389806
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AA seq
350 aa
AA seq
DB search
MDYFKSLAQELFSTNYETPPSSIQFIDAALSCTSPHFAPSYTDPNQKRIIRRHLVSFLQD
YISFKPSIDAFMHDDGTSVNLLNANGELQLSSSTPSIPLTIWLHESYPFIAPIVLMSTNT
TYPIYDNHPFVDSSSGSISTFYLVNWKYPGCNLSDLVHNLVNIFSHNHPFYYSPSTNDFF
HPSLASRREAIDRLSCTLHYDMTELLSKTHEEVEELSSLKEHMVRRVIVAEFSVDESENE
MTELKERVKVLTDEADKLSSWLRDKDQDLSPEEYKVEDEFEAIDENSKVLLDSIAADKAT
EDLMYSLDKAVEQGVMPFGTYMKQVRLLAKEQYFGRAKLEKMGISLEWLH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggattacttcaaatcattagctcaagagttattctccacaaactatgaaacacctcca
tcttcaatccaattcatagatgctgcactttcttgtacaagtccacattttgcaccatca
tacacagatcctaaccaaaaacgtataattcgaagacacctcgtctcttttcttcaagat
tatatctctttcaaaccttccatcgatgcattcatgcatgacgatggcactagtgtcaac
ttactcaacgcgaatggagagttgcaactctcttcctccaccccttcaatccctcttacc
atttggttacatgaaagttacccttttatagctcctattgtactcatgtcaacaaatact
acttatccaatttatgataaccatccttttgttgactcttcatcaggttctatttcaaca
ttttacttagtaaattggaagtaccctggctgcaacctctctgaccttgtacacaacctt
gtcaacatcttttcacataatcatcctttctactattcgccttcaactaacgatttcttt
cacccttctttagcttctaggagggaggctatagaccgtctctcgtgcacacttcactat
gacatgacagaattactctccaagactcatgaagaagttgaggagctttcaagccttaaa
gaacatatggttagaagggtaattgttgctgagttttcggttgatgagagtgaaaatgaa
atgacggagttgaaggaaagggtgaaagtcttgacagatgaagcggataaactgtcgagt
tggctaagagataaggatcaagatttaagtccagaggagtataaagttgaggatgaattt
gaagcgattgacgagaattcaaaggtactacttgatagcattgcagcagataaagcaaca
gaggatttgatgtactctttagataaggcagttgagcaaggtgtaatgccttttggtaca
tatatgaaacaagtgagacttttggccaaagaacaatactttggtagagccaagcttgaa
aaaatgggaatatctctcgaatggcttcattga
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