Solanum pennellii: 107030626
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Entry
107030626 CDS
T04130
Name
(RefSeq) cell division control protein 48 homolog D-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
spen
Solanum pennellii
Pathway
spen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107030626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107030626
03009 Ribosome biogenesis [BR:
spen03009
]
107030626
04131 Membrane trafficking [BR:
spen04131
]
107030626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107030626
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107030626
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107030626
Membrane trafficking [BR:
spen04131
]
SNARE
SNARE associated proteins
Others
107030626
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107030626
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107030626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_14
AAA_22
AAA_33
TIP49
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_17
Parvo_NS1
ATPase_2
AAA_18
ABC_tran
IstB_IS21
Viral_helicase1
AAA_7
NB-ARC
AAA_24
AAA_lid_PRS2_C
TsaE
NACHT
DUF815
Zeta_toxin
Vps4_C
Zot
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
107030626
NCBI-ProteinID:
XP_015087377
LinkDB
All DBs
Position
9:1572729..1578354
Genome browser
AA seq
804 aa
AA seq
DB search
MSNKAESSDSKGTKKDFSTAILERKKSPNRLVIDEAINDDNSVVSLHPDTMQKLQFFRGD
TILIKGKKRKDTICIAIVDDKCDESKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDSIEGVTGNLFDAYLKPYFVEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVNREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGASNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERICKETHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFSTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTKWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGGSRGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDIDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDVERERRRRDN
PEAMEEDVNDEVSEIKPAHFEESMKYARRSVSDGDIRKYHAFAQTLQQSRGFGSEFRFAG
PTTGTTDPFATSAGGAADEDELYN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaagctgaatcatctgattcgaaggggactaagaaggattttagtacagca
attttggagaggaagaaatcacctaatcgtcttgtcattgatgaagcaatcaatgatgat
aattctgttgtttcacttcatcctgataccatgcaaaagctccagttttttcgtggtgac
acaattttgataaagggaaagaaaagaaaagatactatctgcattgccattgttgatgac
aagtgtgatgagtcaaagattaggatgaacaaggttgtcagaaataaccttagggttcgt
cttggtgatgttgtctctgttcatcaatgccctgatgtcaaatatggtaaacgtgtgcac
attcttccaattgatgacagcattgagggagttaccggaaatctgtttgacgcttacttg
aaaccctatttcgttgaagcatatcgaccagtgaggaagggtgatctatttcttgtaaga
ggaggaatgagaagtgtagaattcaaggttattgaaactgatccagctgaatattgtgtt
gtcgccccagatactgagatattctgtgagggtgaacctgtgaacagagaagatgagaat
cggttagatgaggttggttatgatgacgttggtggcgtgcgtaaacaaatggctcagatc
cgcgagcttgttgagcttccgttgaggcatccacaactgttcaaatctattggtgtgaaa
cctcccaaaggaattctcttgtatggacctcctggatcagggaagacattgatagctcga
gcagttgctaatgagactggtgcgttcttcttttgtattaatggaccagagatcatgtcc
aaattggcaggagaaagtgaaagcaatctcaggaaagcatttgaggaagctgagaagaat
gcaccttcaattatttttattgatgaaattgattcaatagctcctaaacgtgagaagact
catggagaggtcgagaggaggattgtttctcagctcttgactctcatggatggtctcaaa
tcacgtgcccacgtaattgtcatgggtgcctctaatcgcccaaatagtattgaccccgcc
ctaagaaggtttggcagattcgatagggagatcgatattggtgtcccggatgaagtcggg
cgtcttgaggtgcttcgtatccatacaaagaacatgaagctcgctgaagatgttgatttg
gaaaggatttgcaaagaaacacatggttatgttggtgcggatttggcagctttgtgtact
gaggctgcacttcagtgcatcagagagaagatggatgtgattgatttggaagatgaatct
atcgacgctgagatattaaattcaatggctgtgaccaacgagcacttctcaactgctctt
gggacaagcaatccatctgccctgcgtgaaactgttgttgaagttcctaatgtctcctgg
gaggacattggaggccttgagaatgtcaagcgtgagcttcaagagactgttcaatatcct
gtggaacatcccgagaagttcgagaagtttggtatgtctccttctaagggtgttctcttc
tatgggccacctggatgcggaaaaactttgttggcgaaggctattgcaaacgaatgccag
gccaattttattagtatcaagggtccagaattgcttaccaagtggtttggagagagcgaa
gccaatgttagagaaatattcgacaaggctcgagggtctgctccttgtgtcctgtttttt
gatgagttggactcgattgctactcagagaggcggtagcagaggagatgccgggggagct
gctgatagagttttgaatcaactcctcaccgagatggatggcatgaatgccaagaaaacg
gttttcatcatcggtgccaccaacaggcctgacattattgatcctgcacttctacgtccc
ggtcgtcttgaccaattgatttacattcctcttcctgacgaggactcccgccatcaaatt
ttcaaggcatgcctgcggaaatcacccctttctaaggatatcgatctcagagctcttgca
aaatatacgcaagggttcagcggagctgacattacagagatctgtcaacgtgcatgcaaa
tacgctatccgagagaacattgagaaagatgttgagagggagagaaggagaagggataat
ccggaagctatggaggaagacgttaacgatgaagtatctgagatcaagcctgctcacttt
gaggaatcaatgaagtacgctcgaaggagtgtgagtgatggtgatatccgcaagtaccac
gcgtttgctcagacgttgcagcagtcccgagggtttggttctgagttccggtttgcaggt
cccaccaccgggactactgatccctttgcaacttctgctggtggtgcagcagatgaagat
gaactgtataactag
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integrated database retrieval system
