Solanum pennellii: 107030783
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Entry
107030783 CDS
T04130
Name
(RefSeq) protein TIME FOR COFFEE isoform X1
Organism
spen
Solanum pennellii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe-ADH
Motif
Other DBs
NCBI-GeneID:
107030783
NCBI-ProteinID:
XP_015087521
LinkDB
All DBs
Position
9:78984785..78991961
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AA seq
1683 aa
AA seq
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MDRNREARRTGMVAATSNGLSRRRHRSNSLRDSPDEEGGVEIQESVRLRERVKKDRDRER
DRERDRERDRERDIRERDIRDRDRDRSSRSKRRRGDRLMMHRGGGGGEDGGDDSSEESVN
DEEDEDDEETTTTTTNVVSASTRLLPPPNPLPATMGGSAISNHHHHHNNNHNHHHIPPRK
NFPPNVGGKVFRAAPVWKTGDEMIGVSVPRKARSASTKRSHDWISGTSGGGGNSGVVTGD
QIHQQVSTASPVGQNIPATSPSPAAPLSPSSSNVSVRKKFKPNGQKRPPAKSPPKASSSN
PEELEIEIAEVLYGLMTQSQGPSKKESVPIDTREVNNRSRVSSPASNSNSSATPLSVVAP
KRKRPRQVLENPGGFSVRSTPISSSTAKVEMDQTTMKLEVFSPNLEKNPQSAAENGVSLY
DLSGSAQSLPAAVDPVPEPMKMESDVKRRPDETEFVESKEEVNSPKRESFTLGVDNSIRE
DVAVTQVSGIVSGVENQREEKFQIDLMAPPPQLRSSPEREAEMSFGSAAVDSNKHIISSE
NIVERKPAVTEKDDERIGKAEKDEGMISVEAEEKKTKAAVEEINAHKISESSRGRNINLD
LDLEKPEKDSGVSGKFQQHSQKLQQHQPPPPPQKATKEESVLEKTGQSSSLPMPISMASW
PGGLPPMGYMAPLQGVVAMDGSTVSSAAPMQPLFSQPRPKRCATHCYIARNIHCLQQFMK
MHPFWPPAAGTAPFFGAKTNLNVMPSADLHGNLAGRGASAGPDKGQGLAIFPSNGGKDKV
QPANIADAAQRKQQMLLQQALPPVAPNNLLHGPAFIFPLNQQQAAAAAAVRPGPAKSPST
LGPSVPSNTTNAAAGTASATAGGAATAISFNYPNMSPNDAQYLAILQNNAYAFPIPAVGP
PPNYRGTQPQPMPLFNGSFYSSQMIHPSQVQQHQQHQQQQHQQQQQQQQHQQHQQQQQQH
QQQQQQQQPATSQSQQMQQGQQNTSMSSGSSSSHKHLQNQQQRSQGNAINGGNSGGNLHS
FPGTKNHPSQSPAQSSQNQHMPPQTRHIENEVGSEDSPTAERKRSHGPINVYNQNFAMPM
HPSNFGMMTPPANFGVASSAGGGSNHQTEKKPQQQQQQPGLKASLESAPPQPFAMSFASF
NGSTTGPGIDMSMAHNHAIFQSLPEATRQNLQMAAAAAAQAVQQKKNFRVSEDGKSGSGD
QSGADAERKGLAMKPSGNAGQSIAFSRSDTSDASGSTIAANSVIDSSSRSLNLPSGASWT
ARAAMPNAMGSVNVPNAQLQAQIQQQQQQMLQLHKQHQQHQFAAAVAARSKTSASSNGNV
YSEHLTSSASAASKFPNAMSAFPQNLVQSGNNSNQAQSPQWKNSTRTSTSQAPSSLSSTS
SLKSLSQQQQQQQQHVRSQQSHTQISFGTNQRSTPPPPGQQPPNSNQSPSSPMMVGSPTT
SSISKGASGSPRPTNSATTSNKTGQNSSLSTQQGKSSTSVPNQKSSPAGGRNVPSILGNP
HNIASTSGGGTKPQMSQQQQQQHLHKSMQQAQLFFSSPYVQAQPPHSSGTSSAGQATGGY
YLQQRRRPDQPGQQLPGSSAASSSSGMLTLCPVTLGGGTTSDPAKAIAAAAAANNMKGGV
LPSQGILHAAQYTTQTSGSQHQLLPAGFSYVHPVPAAVQVKPAEQKQPAGNDNLHACWQP
EKK
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggataggaatagagaagcaagaagaactggtatggtagccgccacatctaatggatta
tcaagacgcagacatagaagtaacagtcttagagattcccctgatgaagaagggggtgta
gagatacaagaatctgtcaggttaagggagagagtgaagaaagatcgagatcgagagaga
gacagagaacgggatagagaaagagatagagaaagggatattagagagagggatattaga
gatagagatagagataggtcaagtcggagtaaaagaagaagaggtgatagattgatgatg
cacagaggtggtggtggtggagaagatggtggagatgatagttcagaagaaagtgtaaac
gatgaagaagatgaagatgatgaagagacgacgacaacaacaacaaacgttgtttcagct
agtacaagattgttgccgccgccgaatccgttaccggcgacgatgggagggtcggcgatt
tcaaatcatcatcatcaccataacaacaatcataaccatcatcatataccgcctcggaaa
aattttccaccaaatgttggtggaaaggtgtttagagcagcacctgtatggaaaactggt
gatgaaatgattggtgtttctgttccaagaaaagctcgttctgcatctacaaagaggtct
catgattggatttctgggactagtggtggtggtggtaacagtggtgttgtcaccggagac
caaattcatcagcaagtatcaacagcttcgccggtgggacagaacattccggctacatca
ccatcgccggcagctcctttatctccatcttcatctaatgtttcagtcagaaaaaaattt
aagcctaatggacaaaagcggccgccggcaaagtcacctccaaaagcttcttcatctaac
cctgaagagcttgagattgagattgctgaagttctgtatggattgatgactcagtcacaa
ggaccttcaaaaaaagaaagtgtaccaattgatacaagagaagttaataacagatccaga
gtttcatctccagcttctaattcaaactcatcagcaactcctttatctgttgttgctcca
aagaggaaaagaccaaggcaagtcttggaaaatcctggaggatttagtgtaagaagcacc
cccatttcatcttctacagctaaagttgagatggatcagacaacaatgaagttagaggtt
ttttcacctaatttggagaagaacccacagtctgctgctgaaaatggtgtttctttatat
gatttaagtggttctgctcaaagtttgccggcggcagtagatccggtaccggagccgatg
aagatggaatctgacgtcaagaggaggcctgatgaaactgaatttgtggagagtaaggag
gaagtgaattccccaaagagggaatcttttactttgggagtagataatagtattcgtgag
gatgttgcagttacccaagtgagtgggattgtttcaggagtggaaaaccagagagaggag
aagttccagatagatcttatggctcctcctccacagttaagatcatcacctgaaagagaa
gctgagatgagttttggctcagcagctgtggatagtaataagcatattatatcatcagaa
aatatagttgaaaggaagcctgctgtgacagaaaaggatgatgaaaggattggcaaagct
gagaaagatgaagggatgattagtgttgaagctgaggaaaagaagactaaagcagctgta
gaagaaattaatgctcataagataagtgagagtagtaggggtaggaatattaatcttgat
cttgatttggaaaagccagaaaaggatagtggtgtaagtggcaaatttcaacagcacagt
caaaagttgcagcagcaccaaccacctcctccaccacaaaaagctactaaagaagaatca
gttcttgaaaaaactggtcaatccagctctttgcctatgccaatttctatggctagttgg
cctggtgggcttcctcccatgggatacatggcgccgttgcaaggagttgtcgctatggat
ggaagcacagtttcttctgctgctccaatgcagcctctgttctctcaaccaaggccaaaa
agatgtgcaacacattgttacattgctaggaacatacattgtcttcagcaatttatgaag
atgcatcctttttggccacctgctgctggcactgcacccttctttggagccaagaccaat
cttaatgttatgccgtcagctgatctccatggaaacttagctggtagaggagcaagtgct
gggcctgataaagggcaggggcttgctatcttccctagtaatggtggaaaagacaaagtt
caaccagctaacattgcagatgctgctcagagaaaacagcaaatgttactccaacaagca
ttgccgcctgttgcgcccaataatctactgcatgggcctgctttcatcttccctttgaat
caacagcaggcagctgcagctgctgctgttcgaccaggtcccgcgaagtcacctagcaca
ttgggcccttctgtcccttctaacacaactaatgctgctgctggaactgcttcagctaca
gctggtggagcggctactgcaattagcttcaactatccaaatatgtctcccaatgatgct
cagtatttggcgatcttgcagaataatgcgtatgctttcccaataccagctgtaggacca
cctccgaattatcggggaactcaacctcagcccatgccattgttcaatggatctttctat
tcttcccagatgattcatccttcccaggttcagcagcatcagcaacatcaacagcagcag
catcaacaacaacagcagcagcagcagcatcagcagcatcaacaacaacaacagcagcat
cagcagcagcaacagcagcagcagccagcaacatcgcagtcccaacaaatgcaacaaggt
caacaaaacacaagcatgtcaagtggatcctcttcatcccacaagcatttgcagaaccag
caacagaggtcccaaggcaatgctattaatggtgggaacagtggtggtaatttacatagt
tttcctgggacaaaaaatcatccatctcagtccccagcacagtcgtcacagaatcagcat
atgcctccacagacgcgccatattgaaaatgaggtgggtagtgaagatagcccaactgca
gagaggaaaaggtcgcatggaccaattaatgtgtacaatcagaattttgctatgcccatg
catccctcaaactttggtatgatgactcctccagctaattttggcgttgcctcttctgct
ggtggcggcagtaatcatcaaactgagaagaagccacagcagcagcagcagcaaccaggt
ctaaaagcgagtctagagtcagcgccgcctcaaccttttgccatgtcgtttgcttcattt
aatgggtccactactggacctggcattgacatgtccatggcacataatcatgctattttc
cagagtctcccggaagctacgaggcaaaatttacagatggccgcagcagctgctgctcag
gctgtgcagcagaagaagaatttcagggtatctgaggatggtaaatctggatctggtgac
cagtctggggctgatgccgaaagaaaaggtttagcaatgaagccttccggaaatgctggt
cagtctattgcattttcaaggtccgatacgtctgatgcctctgggtctactattgcagcg
aacagtgtcattgatagctcatcaaggtccttgaatcttccatctggtgcttcatggact
gctagagctgcaatgccaaatgctatgggatctgtaaatgttcctaatgcacagttgcaa
gctcaaatacagcaacagcagcaacaaatgcttcagcttcataagcagcatcaacaacat
caatttgcagcggctgttgctgctcggagcaagacatcagcctctagtaatgggaatgtt
tattcggaacacttgacttcatctgcttctgctgcttcaaaatttccaaatgcaatgtct
gcttttcctcaaaatcttgtacagagtggtaacaacagcaatcaagctcagtcacctcag
tggaagaactctaccagaacatcaacatcccaagctccatcatctttgtcatcaacgtct
tctctgaaaagcctttctcagcagcagcaacagcagcagcagcatgttagatcccagcaa
agtcacacacagatatcttttggcacgaatcagagatccactcctccaccaccaggacaa
cagcccccaaacagtaatcagtctccctcttcccccatgatggttggctctcctaccact
tcttcaatctcaaaaggtgccagtggtagcccaagacctacaaattctgcaactacaagt
aataaaaccggccagaactcatcattgtcaacacagcagggtaaatcctcaacttcagtt
cccaaccagaagtcatctccagctggtgggaggaatgtgccatcaattcttggaaaccct
cataatatagcttcaacttcaggtggtggaactaagcctcaaatgtcacagcagcagcaa
cagcaacatttacataagagtatgcagcaagcacagctgttcttctctagtccatatgtg
caagctcaacctccacattctagtggtacaagttctgctggtcaagctactgggggttat
tatcttcagcagagacggcgtcctgaccagcctggccaacaactgcctggttcatcagct
gcatcatcatcaagtgggatgttgactttgtgtcctgttacactaggtggtggcaccact
tctgatcctgccaaagcaattgcagcagctgcagctgctaataatatgaaaggtggtgtg
ttgccttcgcagggcattcttcatgctgcccaatatacaacacaaacatcagggagtcaa
catcaacttttgcctgctggtttctcttatgtgcatcctgttcctgccgcggttcaagta
aagccagctgaacagaaacaacctgcgggaaatgacaatttgcatgcgtgctggcagcct
gagaagaaatga
DBGET
integrated database retrieval system
